| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna00944.1-v1.0-hybrid |
| Family | CE8 |
| Protein Properties | Length: 337 Molecular Weight: 35899.6 Isoelectric Point: 8.2981 |
| Chromosome | Chromosome/Scaffold: 6 Start: 9819053 End: 9820683 |
| Description | pectin methylesterase 44 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 13 | 311 | 0 |
| NVVVSQDGKGNFKKIMDAIAAAPSQLSSKHFVILVKKGVYKEYVNIGNTKSNIVLIGEGKDATIISGSKSVGGGQATFDTATFAVRAQGFVAMDIGFENT ADPKSGQAVAVQSSGDHSVFYRCKISGNQDTLLVQAGRQFFRECQIIGSIDFIFGYGTAVFQKCDIYIKKSQIGGTTVITANGRNSSTDSSGFSFQFCTI HGDPQSPTGPTFVTPRGVYLGRSWGTYARTVFMQSSISSILSPQGWLQWNDVPVDKLYFGEYQNSGPGAALGGRVTWPGFHKMSAADADKFTVVKFIDG | |||
| Full Sequence |
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| Protein Sequence Length: 337 Download |
| MELDDVKIAT TPNVVVSQDG KGNFKKIMDA IAAAPSQLSS KHFVILVKKG VYKEYVNIGN 60 TKSNIVLIGE GKDATIISGS KSVGGGQATF DTATFAVRAQ GFVAMDIGFE NTADPKSGQA 120 VAVQSSGDHS VFYRCKISGN QDTLLVQAGR QFFRECQIIG SIDFIFGYGT AVFQKCDIYI 180 KKSQIGGTTV ITANGRNSST DSSGFSFQFC TIHGDPQSPT GPTFVTPRGV YLGRSWGTYA 240 RTVFMQSSIS SILSPQGWLQ WNDVPVDKLY FGEYQNSGPG AALGGRVTWP GFHKMSAADA 300 DKFTVVKFID GDSWLPALGI PHSQGLDPLA NPPMGA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02506 | PLN02506 | 5.0e-105 | 12 | 326 | 317 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 2.0e-106 | 14 | 326 | 316 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN03043 | PLN03043 | 1.0e-106 | 14 | 326 | 316 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| PLN02201 | PLN02201 | 6.0e-119 | 11 | 326 | 318 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-138 | 13 | 312 | 303 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 12 | 326 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 13 | 326 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 3e-28 | 9 | 318 | 1 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 3e-28 | 9 | 318 | 1 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 1e-27 | 9 | 318 | 1 | 341 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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