| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna01138.1-v1.0-hybrid |
| Family | GT19 |
| Protein Properties | Length: 540 Molecular Weight: 59604.3 Isoelectric Point: 9.725 |
| Chromosome | Chromosome/Scaffold: 6 Start: 31225138 End: 31229305 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT19 | 120 | 499 | 0 |
| VFVVSGEVSGDTIGSRLMSSLKKLSPVPVRFSGVGGTMMSSQGLKSVFPMEDIAVMGLLELLPHLNKLRVKLQETIEAALLFQPHVVVTVDSKGFSFRLL KQLRARYSQKSFEIPVHFHYVAPSFWAWKGGEARLRGLAGFVDHLLCILPNEEEVCRSNGLVATFVGHPILEDVCELNLDTSPHEWKIEGNSEIFRRNHA IPTGATIISLLPGSRLQEVTRMLSLFANTIELLQVSLPELVPLIHVASNQHVKDFVTGFTNKWHVPAILIPGGSLHQKYDAFSASSVALCASGTVALELQ LARLPCVVAYRAHFLTEWIIRYKAKISYISLSNILLDSAIIPEALFHACTPAMLASLTSKMIHDTGLREKQIVAAEKVTR | |||
| Full Sequence |
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| Protein Sequence Length: 540 Download |
| MFSILITIKT ETLNSNSHRS EISPINVLRS GRVAGEQNGV GGGRRFGWPS TEKSNKYMSF 60 FFKGGTLQPG WNAEIFGMSF RTTWNVGGGN IVGFSRLMRR YTSVRRSVLD MAAKDGELRV 120 FVVSGEVSGD TIGSRLMSSL KKLSPVPVRF SGVGGTMMSS QGLKSVFPME DIAVMGLLEL 180 LPHLNKLRVK LQETIEAALL FQPHVVVTVD SKGFSFRLLK QLRARYSQKS FEIPVHFHYV 240 APSFWAWKGG EARLRGLAGF VDHLLCILPN EEEVCRSNGL VATFVGHPIL EDVCELNLDT 300 SPHEWKIEGN SEIFRRNHAI PTGATIISLL PGSRLQEVTR MLSLFANTIE LLQVSLPELV 360 PLIHVASNQH VKDFVTGFTN KWHVPAILIP GGSLHQKYDA FSASSVALCA SGTVALELQL 420 ARLPCVVAYR AHFLTEWIIR YKAKISYISL SNILLDSAII PEALFHACTP AMLASLTSKM 480 IHDTGLREKQ IVAAEKVTRL LCASAKNLHN LEELHRRLSL PCYTPSMIAA STILCHVRS* 540 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 3.0e-36 | 121 | 505 | 401 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 2.0e-54 | 120 | 521 | 406 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 3.0e-73 | 120 | 509 | 394 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 8.0e-101 | 118 | 500 | 385 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 3.0e-101 | 118 | 491 | 379 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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