Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna01234.1-v1.0-hybrid |
Family | GH9 |
Protein Properties | Length: 1205 Molecular Weight: 134623 Isoelectric Point: 7.9742 |
Chromosome | Chromosome/Scaffold: 6 Start: 31521912 End: 31531478 |
Description | Major facilitator superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 29 | 494 | 0 |
NYGDALAKSLLYFESQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSVIEYRQQIAEAGELEHAMEAIKWGTDYF IKAHTGPNVLWAEVGDGDTDHYCWQRPEDMTTSRQAYKIDQNNPGSDLAGETAAAMAAAALVFKKTNPHYAHLLLHHAQQLFEFGDKYRGKYDEEGRLGV VKSYYASVSGFKDELLWAALWLYKATDNEEYLMYVINEAENFGGIGWAITEFSWDVKYAGIQVMASKLLNEEKHKKHSAILEKYRSKAEYYICSCLNKNL DTTNVERTPAGLLYIRQWNNMQYVSTASFLLTMYSDFLKSSNQKLSCHGGTVAHQEILSFAKSQVDYILGSNPSNMSYLVGYGSNYPQRVHHRGASVVSY RENKAFIGCTQGYDNWYGRLEPNPNVLVGALVGGPDSHDNFLDQRDNYMQTEACTYNTAPLVGVFA |
Full Sequence |
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Protein Sequence Length: 1205 Download |
MVKSKPQHFA QWCFLSLIFA ISFTAKALNY GDALAKSLLY FESQRSGRLP YNQRVTWRDH 60 SGLTDGLEQG VDLVGGYYDA GDHVKFGLPM AFTVTMLSWS VIEYRQQIAE AGELEHAMEA 120 IKWGTDYFIK AHTGPNVLWA EVGDGDTDHY CWQRPEDMTT SRQAYKIDQN NPGSDLAGET 180 AAAMAAAALV FKKTNPHYAH LLLHHAQQLF EFGDKYRGKY DEEGRLGVVK SYYASVSGFK 240 DELLWAALWL YKATDNEEYL MYVINEAENF GGIGWAITEF SWDVKYAGIQ VMASKLLNEE 300 KHKKHSAILE KYRSKAEYYI CSCLNKNLDT TNVERTPAGL LYIRQWNNMQ YVSTASFLLT 360 MYSDFLKSSN QKLSCHGGTV AHQEILSFAK SQVDYILGSN PSNMSYLVGY GSNYPQRVHH 420 RGASVVSYRE NKAFIGCTQG YDNWYGRLEP NPNVLVGALV GGPDSHDNFL DQRDNYMQTE 480 ACTYNTAPLV GVFAKFSELE TINGFSFVDF RLLDLAGGSW RASAVKLCVT DTTKRLPCTL 540 ASLFREAYAF LRPRLERFHW GLGRSRSPQL RELWVTAFVA LLWGIWHFRN RDKFDVLLSE 600 VLTEEKKNGA HIGLSPVLVS SNSEKDGAAN DGSMVDFRGN PIDKSRTGGW LAAGLILVTE 660 LSERICVMGI SMNLVTYLVG NLHLTSAKSA TVVTNFMGTL NLLGLLGGFV ADAKLGRYLT 720 VLLSAAITAL GITLLTIATS IPSMRPPACK GNQECVEATG SQLALLYAAL YMTALGGGGI 780 KSNVSGFGSD QFDSSDPKEE KSMIFFFNRF YFGISVGSLF AVIVLVYIQD NIGRGLGYGI 840 SAGTVVIALI VLLLGTPFYR YKKPRGSPLT MIWRVIFLAW KKRTHPYPSH PSLLNQYEEA 900 KIPHTQRFKC LDKAAILDEL AASGENRSNP WVVSTVTQVE EVKLVFKLLP IWSTCILFWT 960 VYSQMTTFTI EEATFMNRKV GSFEIPAGSF SAFLFITILL FTSLNEKLFV PLARKLTKSP 1020 QGLTSLQRVG IGLVFSTVAM IAAAIVEKQR REMAVDHNTK IRAFWLVPQY FLVGAGEAFV 1080 YVGQLEFFIR EAPDRMKSMS TGLFLSTISM GFYVSSLLVT VVDKLTHKSW LRSDLNNGRL 1140 ENFYLLLAAL GTINFLVFLA FATRHQYKGQ QYNDPDDSGK EMKNSNDMIL EDIEKIRIEA 1200 KEGP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02420 | PLN02420 | 0 | 1 | 500 | 512 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 15 | 497 | 483 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 5 | 501 | 499 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 29 | 494 | 467 | + Glycosyl hydrolase family 9. | ||
PLN00119 | PLN00119 | 0 | 13 | 495 | 483 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005215 | transporter activity |
GO:0005975 | carbohydrate metabolic process |
GO:0006857 | oligopeptide transport |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 27 | 483 | 2 | 415 | A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1 |
PDB | 1ksc_A | 0 | 27 | 483 | 2 | 415 | A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1 |
PDB | 1ks8_A | 0 | 27 | 483 | 2 | 415 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 27 | 499 | 23 | 462 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 27 | 510 | 3 | 452 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |