Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna01296.1-v1.0-hybrid |
Family | GT14 |
Protein Properties | Length: 432 Molecular Weight: 49205.7 Isoelectric Point: 9.2841 |
Chromosome | Chromosome/Scaffold: 6 Start: 1792485 End: 1795441 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 85 | 337 | 0 |
FAYFVSGSNGDGKMLKRTLQALYHPHNQYVVHLDAESPPEERLDLQNYVSNHEVFKKFGNVRMITKANLVTYRGPTMVANTLHAAAILLKEGGDWDWFIN LSASDYPLVTQDDLLHTFSYLPRDLNFIDHTSNIGWKEFQRAKPLIVDPGLYMTKKTDVFWVTQRRSVPTAFKLFTGSAWMALSKPFIDYCIWGWDNLPR TVLMYYANFISSPEGYFHTVICNAQEFRNTTVNTDLHFIAWDNPPKQHPHHLN |
Full Sequence |
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Protein Sequence Length: 432 Download |
MKKLKSYYMH LRHQQQKTME LKWILPLAIG SIVSLFLLFL TTLTTSDGSP LLPFYRYSIS 60 LSNSVFIESK LHPLPISTLP PPPRFAYFVS GSNGDGKMLK RTLQALYHPH NQYVVHLDAE 120 SPPEERLDLQ NYVSNHEVFK KFGNVRMITK ANLVTYRGPT MVANTLHAAA ILLKEGGDWD 180 WFINLSASDY PLVTQDDLLH TFSYLPRDLN FIDHTSNIGW KEFQRAKPLI VDPGLYMTKK 240 TDVFWVTQRR SVPTAFKLFT GSAWMALSKP FIDYCIWGWD NLPRTVLMYY ANFISSPEGY 300 FHTVICNAQE FRNTTVNTDL HFIAWDNPPK QHPHHLNLGD FPRMIGSNAP FARKFRKDDP 360 VLDKIDSELL FKGPGMLVPG GWCTGRSENG SDPCSVIGDT TVLRPSPGAK RLELLISSLM 420 SNENFRPKQC K* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam02485 | Branch | 4.0e-84 | 85 | 345 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. |
PLN03183 | PLN03183 | 0 | 19 | 431 | 421 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000000003 | 97 | 360 | 97 | 371 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000000003 | 97 | 360 | 97 | 371 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000000003 | 97 | 360 | 97 | 371 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000000003 | 97 | 360 | 97 | 371 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.000000008 | 97 | 360 | 97 | 371 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |