Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna01393.1-v1.0-hybrid |
Family | GT29 |
Protein Properties | Length: 487 Molecular Weight: 54764.6 Isoelectric Point: 8.7883 |
Chromosome | Chromosome/Scaffold: 6 Start: 38023282 End: 38026683 |
Description | MALE GAMETOPHYTE DEFECTIVE 2 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT29 | 170 | 364 | 4.2039e-43 |
CYNKTICEEHLNLLLPAKPPFHPRQFRTCAVVGNSGDLLKTEFGKEIDAHDAVIRDNEAPVNEKYAKYVGLKRDFRLVVRGAARNMVSILNGSDDEVLII KSVTHKDFNAMIKSIPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIVDMYGFTVDPGYTEWTRYFSTPRQGHNPLQGRAYYQLLECLGVIRIH |
Full Sequence |
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Protein Sequence Length: 487 Download |
MEVSEAMRTH KGSNSSSSNR RPTTVLYLVC AAAFFSLVVF AIQSSFFAQS SSSSVKLDLN 60 TEQDIRTLSQ FQSSVQQCVA NRGLGLTADI IDHCNLILKY PPGTNSTWYN AQFKVFEPLQ 120 YKFNVCEAVL LWEQYRNMTT VLTREYLDVR PKGWEEYAPK RIAQLGTDKC YNKTICEEHL 180 NLLLPAKPPF HPRQFRTCAV VGNSGDLLKT EFGKEIDAHD AVIRDNEAPV NEKYAKYVGL 240 KRDFRLVVRG AARNMVSILN GSDDEVLIIK SVTHKDFNAM IKSIPNPVYL FQGIVLRRGA 300 KGTGMKSIEL ALSMCDIVDM YGFTVDPGYT EWTRYFSTPR QGHNPLQGRA YYQLLECLGV 360 IRIHSPMRSK RKQGWSDIPT REMIGRAHAA ALRLKRGQDG DLGQFGSCKV TGTVDPDKIG 420 PISGSADMSD VRKSSNYSKW EVLPFESLRK EAQDHYIQME GVSLYKMDGN KLDDLVCVRH 480 SSKSEV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00777 | Glyco_transf_29 | 2.0e-49 | 156 | 367 | 255 | + Glycosyltransferase family 29 (sialyltransferase). Members of this family belong to glycosyltransferase family 29. |
Gene Ontology | |
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GO Term | Description |
GO:0006486 | protein glycosylation |
GO:0008373 | sialyltransferase activity |
GO:0030173 | integral to Golgi membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wnf_A | 0.00000000006 | 196 | 342 | 98 | 266 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2wnb_A | 0.00000000006 | 196 | 342 | 98 | 266 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
PDB | 2wml_A | 0.00000000007 | 196 | 342 | 98 | 266 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |