| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna01870.1-v1.0-hybrid |
| Family | GT5 |
| Protein Properties | Length: 582 Molecular Weight: 63637 Isoelectric Point: 5.0384 |
| Chromosome | Chromosome/Scaffold: 5 Start: 5568465 End: 5571500 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 87 | 553 | 0 |
| LVFVGAEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTVSPRYDQYKDAWDTNVLVEIEIGGRVEPVRFFHCYKRGVDRVFVDHPWFLEKAALEAPRVLNL NSNEYFSGPYGEDVVFICNDWHTALLPCFLKTIYKPMGIYTSAKVAFCIHNIAYQGRFGMEDFELLDLPDQLKGSFDFIDGYNKPVKGRKINWMKAGILE SDRVVTVSPYYAQELISGEDKGVELDNIIRKTGITGIVNGMDVQEWNPATDKHLHVNYDETTVLDAKPLLKEALQAEVGLPVDKDIPLIGFIGRLEEQKG SDILVEAIPELAGENLQIIVLGTGKKDLEKQIEQLETKYPGTAVGVVKFNVPLAHMIIGGADFMLIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVK EGFTGFQMGGFNVDCDEVDPADVLAISTTVRRAVTSCGTSAMKEMIQNCMAQDLSWKEPSKQWEKML | |||
| Full Sequence |
|---|
| Protein Sequence Length: 582 Download |
| MATVTTSNFV PGTSHVNGAS GSEARTKLGQ MGLWNQSMTH NGLKSLSNLD MLRIRTRPNA 60 FSMQVMRKAA SDIGSEGRIV CGHGMNLVFV GAEVGPWSKT GGLGDVLGGL PPAMAANGHR 120 VMTVSPRYDQ YKDAWDTNVL VEIEIGGRVE PVRFFHCYKR GVDRVFVDHP WFLEKAALEA 180 PRVLNLNSNE YFSGPYGEDV VFICNDWHTA LLPCFLKTIY KPMGIYTSAK VAFCIHNIAY 240 QGRFGMEDFE LLDLPDQLKG SFDFIDGYNK PVKGRKINWM KAGILESDRV VTVSPYYAQE 300 LISGEDKGVE LDNIIRKTGI TGIVNGMDVQ EWNPATDKHL HVNYDETTVL DAKPLLKEAL 360 QAEVGLPVDK DIPLIGFIGR LEEQKGSDIL VEAIPELAGE NLQIIVLGTG KKDLEKQIEQ 420 LETKYPGTAV GVVKFNVPLA HMIIGGADFM LIPSRFEPCG LIQLHAMRYG TVPIVASTGG 480 LVDTVKEGFT GFQMGGFNVD CDEVDPADVL AISTTVRRAV TSCGTSAMKE MIQNCMAQDL 540 SWKEPSKQWE KMLLSLEVAG GEPGFEGEEI APLAKENVAT P* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 2.0e-84 | 90 | 556 | 510 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 7.0e-109 | 85 | 552 | 507 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 6.0e-126 | 85 | 552 | 500 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 6.0e-166 | 85 | 556 | 501 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-169 | 86 | 553 | 504 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 85 | 581 | 10 | 536 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
| PDB | 3vue_A | 0 | 85 | 581 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 85 | 557 | 1 | 477 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 85 | 558 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 85 | 558 | 1 | 478 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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