| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna02152.1-v1.0-hybrid |
| Family | AA1 |
| Protein Properties | Length: 540 Molecular Weight: 60430.4 Isoelectric Point: 7.2719 |
| Chromosome | Chromosome/Scaffold: 2 Start: 8612633 End: 8615346 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 18 | 524 | 0 |
| VKEATYTRLCSTKKILTVNGKFPGPVLRAYRGDTIYVNVHTGGRHNITIHWHGVRQPRNPWSDGPEYITQCPIQPGGSFNQKIIFSTEEGTLWWHAHSDW SRAPVHGAIYVYPKPGTSHPFPKPHAEIPIILGEWWKQDVMKEFQEFVRSGGPPNVSDAYTINGQPGDLYPCSKSVNAIVNEIVFLAVANHNLTVVVVAT DASYTKPIETDYITISPGQSMDVLLVTNQQRPGLYYMAARAYNGNPVVGFDTTTTTAIVEYNNGNGNKNDTPLFPYLPGFNDTARAFGFFSRLKSLPVDF KEPVPKTIDRRIISTIAINTFPCQGNQTCQGPNGTRLAASMNNISFVEPNTVDILVAYYYYINGVFKKGFPNYPPYAYNFTGQNLPLVLQIPKRGTKVKV IEYGTDMEVVFQNTNLVGGLDHPMHLHGFDFYIIGTGFGNFDEQNDPKSYNLVDPPLRNTVTVPISGWDAIRFKANNPGVWYLHCHFDRHLTWGMDTVFI VNNGKHK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 540 Download |
| MEPSEDNFVN ESDSSNLVKE ATYTRLCSTK KILTVNGKFP GPVLRAYRGD TIYVNVHTGG 60 RHNITIHWHG VRQPRNPWSD GPEYITQCPI QPGGSFNQKI IFSTEEGTLW WHAHSDWSRA 120 PVHGAIYVYP KPGTSHPFPK PHAEIPIILG EWWKQDVMKE FQEFVRSGGP PNVSDAYTIN 180 GQPGDLYPCS KSVNAIVNEI VFLAVANHNL TVVVVATDAS YTKPIETDYI TISPGQSMDV 240 LLVTNQQRPG LYYMAARAYN GNPVVGFDTT TTTAIVEYNN GNGNKNDTPL FPYLPGFNDT 300 ARAFGFFSRL KSLPVDFKEP VPKTIDRRII STIAINTFPC QGNQTCQGPN GTRLAASMNN 360 ISFVEPNTVD ILVAYYYYIN GVFKKGFPNY PPYAYNFTGQ NLPLVLQIPK RGTKVKVIEY 420 GTDMEVVFQN TNLVGGLDHP MHLHGFDFYI IGTGFGNFDE QNDPKSYNLV DPPLRNTVTV 480 PISGWDAIRF KANNPGVWYL HCHFDRHLTW GMDTVFIVNN GKHKKEKLLP PPPDMPPCY* 540 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam07732 | Cu-oxidase_3 | 1.0e-42 | 18 | 133 | 118 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. |
| PLN02191 | PLN02191 | 7.0e-62 | 27 | 517 | 539 | + L-ascorbate oxidase |
| PLN02604 | PLN02604 | 3.0e-65 | 27 | 516 | 532 | + oxidoreductase |
| TIGR03388 | ascorbase | 9.0e-78 | 27 | 516 | 545 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| TIGR03389 | laccase | 0 | 18 | 538 | 539 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 27 | 516 | 19 | 521 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| PDB | 1asq_A | 0 | 27 | 516 | 19 | 521 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| PDB | 1asp_B | 0 | 27 | 516 | 19 | 521 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| PDB | 1asp_A | 0 | 27 | 516 | 19 | 521 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| PDB | 1aso_B | 0 | 27 | 516 | 19 | 521 | A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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