Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna02225.1-v1.0-hybrid |
Family | GT47 |
Protein Properties | Length: 592 Molecular Weight: 68334 Isoelectric Point: 8.3924 |
Chromosome | Chromosome/Scaffold: 5 Start: 28236846 End: 28238621 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 149 | 489 | 0 |
GKYIYVHDIPSKFNQELIQHCDLLSNWTDMCELSSNLGLGPHFPNNERVYSKTGWFATNQFLLEVIFHNRLKQYNCLTNDSSQASAIFVPYYAGLDVSRY LWGSGYRMRDSGALELVKWLREKPEWKRMWGRDHFMVAGRITWDFRRFTDEDSNWGNKLMLLPESRNMTMLTIESSPWSSNDFAIPYPTYFHPSMDTEVY HWQNRMRRQRRRILFSFAGGPRPNLKNSIRNDIIDQCKAARRKCKLLECSTGPGKCHKPIYVMKMFQGSVFCLQPPGDSLTRRSIFDSILAGCIPVFFHP GSAYVQYVWHLPKDYTKYSVLISAFDIKNKTVSIESVLSRI |
Full Sequence |
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Protein Sequence Length: 592 Download |
MGRPVVTTGT CRFVVLASFL LWLLLVCAYY SQYMVSKGVM ITLFNHNIFE DNVVVGASNS 60 VDKKPDVDRK IVFNDQSGAI ITKDAFDHSG EHGNSKKEIG QEAHDNSRGN NEAQIDVNKV 120 SKLPIKEEEI HADTKLDFES ESESDLCLGK YIYVHDIPSK FNQELIQHCD LLSNWTDMCE 180 LSSNLGLGPH FPNNERVYSK TGWFATNQFL LEVIFHNRLK QYNCLTNDSS QASAIFVPYY 240 AGLDVSRYLW GSGYRMRDSG ALELVKWLRE KPEWKRMWGR DHFMVAGRIT WDFRRFTDED 300 SNWGNKLMLL PESRNMTMLT IESSPWSSND FAIPYPTYFH PSMDTEVYHW QNRMRRQRRR 360 ILFSFAGGPR PNLKNSIRND IIDQCKAARR KCKLLECSTG PGKCHKPIYV MKMFQGSVFC 420 LQPPGDSLTR RSIFDSILAG CIPVFFHPGS AYVQYVWHLP KDYTKYSVLI SAFDIKNKTV 480 SIESVLSRIS GREIVKMREE VIRLIPRVVY ADPSNKLKTH DDAFDISVKG VLERVDTIRK 540 DMREGKTTSF DFAEKVSWKF NLFGIKEEHV WDPFFEEQDE KAAKQRKYGK T* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-64 | 146 | 489 | 362 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |