| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna02278.1-v1.0-hybrid |
| Family | GH116 |
| Protein Properties | Length: 1066 Molecular Weight: 118018 Isoelectric Point: 6.2206 |
| Chromosome | Chromosome/Scaffold: 5 Start: 26422045 End: 26432061 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 554 | 926 | 0 |
| GQFLYLEGVEYHMWNTYDVHFYSSFALVMLFPKLELSIQRDFAAAVMMHDPSKMSVLCDGKLVQRKVLGAVPHDIGIHDPWFEVNAYNVYNTDRWKDLNP KFVLQIYRDVVATGDKKFAEAVWPSVYVAMAYMEQFDRDGDGMIENEGFPDQTYDTWSVTGVSAYCGGLWLAALQAASALAREVGDKGSEDYFWCKFQKA KVVYEKLWNGSYFNYDNSGQSASASIQADQLAGQCGSQLIIQLICRYTGACGLMPIVDQDKAQSALEKVYNYNVLKVKNGKLGAVNGMLPDGTVDMTTLQ SREIWSGVTYAVAATMIQEDMLDMAFHTAGGVHAAAWSEEGLGYSFQTPEAWTTTGEFRSLAYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 1066 Download |
| MGDKENGFAE RDDQHSESSI DKVDPGKPAY LTWQRKVNST GKAVVEFNLT LKEVIHMAPI 60 GIRLWRHQRE ETAKGREIMI DPFTKRARSS SHGVPLGGMG GGSIGRSLKG EFQRWQLLPK 120 TCEEDPVLAD QFSVFVSRTN GEKYSSVLCP RNPDVKGNNA SGIGSWDWNL KGDKSTYHAL 180 FPRAWSIYEG EPDPALKIVC RQISPIIPHN YKESSFPVSV FTFTLYNSGS TAANTTLLFT 240 WANSIGGLSE FSGQHVNSRA KVKDGVHSVL LHHKTATGKS PVTFAIAAEQ TDGIHVSECP 300 CFVISGDSKG ISAKDMWNEI KQGYNSFDTA IDNIAPSNRQ CVLNMATIDC LHGSFDGLNS 360 AETSLPSEQG SSIGAAVAAS VTVPPDGVRT VTFSLAWDSP EIIMGGKTYY RRYTKFFGTH 420 GNAAANIAHD AILEHHNWES QIEAWQRPIL EDKRLPEWYP VTLFNELYYL NSGGTIWTDG 480 SPPVHSLVSI GGRKFSLDKS SLGVKNIIDA PQQNDTAVDI LGRMTTILEQ IHMPVASNSA 540 FGPNLLQEGE ENIGQFLYLE GVEYHMWNTY DVHFYSSFAL VMLFPKLELS IQRDFAAAVM 600 MHDPSKMSVL CDGKLVQRKV LGAVPHDIGI HDPWFEVNAY NVYNTDRWKD LNPKFVLQIY 660 RDVVATGDKK FAEAVWPSVY VAMAYMEQFD RDGDGMIENE GFPDQTYDTW SVTGVSAYCG 720 GLWLAALQAA SALAREVGDK GSEDYFWCKF QKAKVVYEKL WNGSYFNYDN SGQSASASIQ 780 ADQLAGQCGS QLIIQLICRY TGACGLMPIV DQDKAQSALE KVYNYNVLKV KNGKLGAVNG 840 MLPDGTVDMT TLQSREIWSG VTYAVAATMI QEDMLDMAFH TAGGVHAAAW SEEGLGYSFQ 900 TPEAWTTTGE FRSLAYMRPL AIWAMQWALS RPNKVLNRET RAEVDQVSLL RDEAGFARVA 960 QLLKLPPEEA ASRSILQFSS EVDIRLLPQG LGHIYPDHIS RGALNGHPPR TCRNPQVEPL 1020 KIGNLQKDMI IEDPFQPLKA AVKESFRCQR MINTPKKSDA GNMRP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 4.0e-9 | 391 | 479 | 91 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 8.0e-11 | 161 | 250 | 93 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 7.0e-43 | 111 | 438 | 337 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 4.0e-65 | 553 | 929 | 396 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 4.0e-158 | 554 | 927 | 379 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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