Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna02314.1-v1.0-hybrid |
Family | GH3 |
Protein Properties | Length: 822 Molecular Weight: 88616 Isoelectric Point: 8.2505 |
Chromosome | Chromosome/Scaffold: 5 Start: 26651087 End: 26655804 |
Description | beta-xylosidase 2 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 81 | 361 | 0 |
KAVPRLGIKDYEWWSEALHGVSNVGPGTKFGGEFPGATSFPQVITTAASFNASLWEAIGQIIIDHRCVKHEVFEYENLNAADLKEIVNVVQAVSDEARAM YNGGMGGLTYWSPNVNVLRDPRWGRGQETPGEDPVVVGAYAASYVRGLQGNAGGGHQLKVAACCKHFTAYDLDNWHGVDRFHFNARVSKQDMEDTFDVPF RMCVKEGKVASVMCSYNQVNGVPTCADPNLLKKTVRAQWGLDGYIVSDCDSVGVFYDNQHYTSTPEEAAAVALKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 822 Download |
MASTTTMASL SLFLFILLQT TSSKAAGQSP TSSSFACNPN DASTKDLPFC RVKLPIHVRV 60 RDLIGRLTLQ EKVKLLVNSA KAVPRLGIKD YEWWSEALHG VSNVGPGTKF GGEFPGATSF 120 PQVITTAASF NASLWEAIGQ IIIDHRCVKH EVFEYENLNA ADLKEIVNVV QAVSDEARAM 180 YNGGMGGLTY WSPNVNVLRD PRWGRGQETP GEDPVVVGAY AASYVRGLQG NAGGGHQLKV 240 AACCKHFTAY DLDNWHGVDR FHFNARVSKQ DMEDTFDVPF RMCVKEGKVA SVMCSYNQVN 300 GVPTCADPNL LKKTVRAQWG LDGYIVSDCD SVGVFYDNQH YTSTPEEAAA VALKAGLDLD 360 CGPFLGLHTE DAVKKGLLSE VDHIDLALAN TLTVQMRLGM FDGSAHPYAN LGPRDVCSPA 420 HQQLALDAAT QGIVLLKNHG TSLPLSTRRH RTVAVIGPNS DVTVTMIGNY AGVACGYTTP 480 LQGIGKYSRT VHQQGCSNVA CKEDTLFGAA IDAARQADAT ILVMGLDQSI EAEFRDRVGL 540 LLPGRQQELI SKVAASSKGP TILVLMSGGP VDVTFAKNDP HIAGIVWAGY PGQAGGQAIA 600 DIVFGISNPG GKLPMTWYPE EYLRNLEMTD MGMRSRPSKG YPGRTYRFYK GPIVYPFGHG 660 LGYTKFVQTV ASAPTVVAVP LDGHHTETST SAGNGTGTRP FAADGKAIRV THAKCSKLSL 720 VVDVDVRNVG NRDGSHTLLV YSSPPAAAGH WVPHKQLVAF EKVYVPARTQ RRVRFNIHVC 780 KHLSVVDRSG IRRIPMGRHD LHIGDHIVHS FSIQAASIIK S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 3.0e-50 | 78 | 497 | 425 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-55 | 433 | 664 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 6.0e-60 | 63 | 394 | 339 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-62 | 191 | 666 | 532 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 7 | 815 | 826 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 191 | 777 | 128 | 696 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3u48_A | 0 | 191 | 777 | 128 | 696 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3u4a_B | 0 | 191 | 777 | 128 | 696 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 3u4a_A | 0 | 191 | 777 | 128 | 696 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 2x41_A | 7e-35 | 59 | 762 | 3 | 658 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |