| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna03924.1-v1.0-hybrid |
| Family | CE8 |
| Protein Properties | Length: 245 Molecular Weight: 27584.2 Isoelectric Point: 9.0196 |
| Chromosome | Chromosome/Scaffold: 7 Start: 9920635 End: 9921369 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 11 | 229 | 0 |
| SFFAGVSGDGFWARDITFENTAGPQKHQAVALRVSSDLAVFYRCSIKGYQDSLYAHSLRQFYRDSHIYGTIDFIFGDASVVLQNCDILVRRPLGHQSNMI TAQGRDNPAENTGNVIHGCRVRPAREFEGVKGSFKTYLDRPWHKYSRTVFLKTDLDGLVDPKGWTEWRGSFAISTLYYGEYMNVGQGASTDKRVRWPSFH VLNSPREVSPYSISHFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 245 Download |
| MTLKQSLVML SFFAGVSGDG FWARDITFEN TAGPQKHQAV ALRVSSDLAV FYRCSIKGYQ 60 DSLYAHSLRQ FYRDSHIYGT IDFIFGDASV VLQNCDILVR RPLGHQSNMI TAQGRDNPAE 120 NTGNVIHGCR VRPAREFEGV KGSFKTYLDR PWHKYSRTVF LKTDLDGLVD PKGWTEWRGS 180 FAISTLYYGE YMNVGQGAST DKRVRWPSFH VLNSPREVSP YSISHFIQGE SWILGTGVPV 240 WLGI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 9.0e-104 | 11 | 244 | 234 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 3.0e-107 | 13 | 239 | 227 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 5.0e-114 | 16 | 238 | 223 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 8.0e-132 | 15 | 230 | 216 | + Pectinesterase. | ||
| PLN02916 | PLN02916 | 2.0e-145 | 15 | 244 | 230 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 18 | 238 | 89 | 309 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 18 | 244 | 93 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 1e-17 | 35 | 205 | 126 | 318 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 1e-17 | 35 | 205 | 126 | 318 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 1e-17 | 35 | 205 | 126 | 318 | A Chain A, Pectin Methylesterase From Carrot |
