Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna03929.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 509 Molecular Weight: 55694.8 Isoelectric Point: 8.6134 |
Chromosome | Chromosome/Scaffold: 7 Start: 9943887 End: 9946119 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 204 | 492 | 0 |
LVVAKDGSGNYKTVTEAITTASKRSGTARYVIYVKAGTYKENVVITSKNIMLMGDGIGKTIITGSKSVGGGSTTFNSATVAVTGDGFIARDITFQNTAGV SNNQAVALRSGSDLSVFYKCSFEGYQDTLYVYSDRQFYRECNIYGTVDFIFGNAAVVLQNCNIYVHNHKTNTVTAQGRSDPNQNTGISIHNCKVTAASDL VLSSTKTYLGRPWREYSRTIFMKTYLDSLINSAGWLEWDGTFALETLYYGEYMNTGPGSSTSGRVKWGGYHVITSSSEASKFTVGNFIA |
Full Sequence |
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Protein Sequence Length: 509 Download |
MAARIFLTLC FVLYLSPFVL GYSANDIKTW CSKTPNPKPC EELLSHNKNQ IPIKQKSQFF 60 QISTQLALDR AMHAHTNFLS LGSKFVNPRA KAAWDDCLEL YDLTIQKLNT TVNPSTKCTQ 120 EDTQTWLSTA LTNLETCREG FSELGVSDFF LPVMSNNVSN LISNTLSINY VPYNPAPPSK 180 DGFPTWVNPG NRRLLQSSSP TANLVVAKDG SGNYKTVTEA ITTASKRSGT ARYVIYVKAG 240 TYKENVVITS KNIMLMGDGI GKTIITGSKS VGGGSTTFNS ATVAVTGDGF IARDITFQNT 300 AGVSNNQAVA LRSGSDLSVF YKCSFEGYQD TLYVYSDRQF YRECNIYGTV DFIFGNAAVV 360 LQNCNIYVHN HKTNTVTAQG RSDPNQNTGI SIHNCKVTAA SDLVLSSTKT YLGRPWREYS 420 RTIFMKTYLD SLINSAGWLE WDGTFALETL YYGEYMNTGP GSSTSGRVKW GGYHVITSSS 480 EASKFTVGNF IAGSSWLPAT NVPFTAGL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02170 | PLN02170 | 9.0e-162 | 5 | 508 | 527 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 7.0e-164 | 27 | 508 | 515 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 4.0e-169 | 5 | 508 | 542 | + pectinesterase/pectinesterase inhibitor | ||
PLN02995 | PLN02995 | 2.0e-169 | 5 | 508 | 530 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 203 | 494 | 299 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 196 | 508 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 202 | 508 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-26 | 201 | 465 | 3 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-26 | 201 | 465 | 3 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-26 | 201 | 465 | 3 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |