Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna04412.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 318 Molecular Weight: 35457 Isoelectric Point: 6.759 |
Chromosome | Chromosome/Scaffold: 6 Start: 33536261 End: 33538961 |
Description | pectin methylesterase 31 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 7 | 297 | 0 |
ITVSQDGSGDYLTVQEAIDAVPLCNTCRTVIRISPGTYRQPVYVPKTKNLITLAGLRPEETVLTWNNTATKIEHHQASRVIGTGTFGCGSTIVEGEDFIA ENITFENSSPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSSQETTGYVFLR CVITGNGGAPYTLLGRPWGPFGRVVFAFTYMDACIKHVGWHNWGKTENERSACFYEYRCFGPGSCPSNRVTWARELVDEEADQFLQHSYID |
Full Sequence |
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Protein Sequence Length: 318 Download |
MSAYVSITVS QDGSGDYLTV QEAIDAVPLC NTCRTVIRIS PGTYRQPVYV PKTKNLITLA 60 GLRPEETVLT WNNTATKIEH HQASRVIGTG TFGCGSTIVE GEDFIAENIT FENSSPEGSG 120 QAVAIRVTAD RCAFYNCRFL GWQDTLYLHY GKQYLKDCYI EGSVDFIFGN STALLEHCHI 180 HCKSAGFITA QSRKSSQETT GYVFLRCVIT GNGGAPYTLL GRPWGPFGRV VFAFTYMDAC 240 IKHVGWHNWG KTENERSACF YEYRCFGPGS CPSNRVTWAR ELVDEEADQF LQHSYIDPDP 300 QRPWLAQRMA LRIPYSA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 1.0e-85 | 7 | 299 | 311 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 2.0e-90 | 7 | 297 | 299 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 3.0e-96 | 1 | 297 | 299 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-107 | 6 | 297 | 300 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 6 | 317 | 312 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 6 | 296 | 8 | 302 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 9.94922e-44 | 9 | 278 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 4e-24 | 10 | 296 | 12 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 4e-24 | 10 | 296 | 12 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 4e-24 | 10 | 296 | 12 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Sequence Alignments (This image is cropped. Click for full image.) |
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