| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna04452.1-v1.0-hybrid |
| Family | GT5 |
| Protein Properties | Length: 1048 Molecular Weight: 115352 Isoelectric Point: 4.9377 |
| Chromosome | Chromosome/Scaffold: 6 Start: 33719478 End: 33729440 |
| Description | starch synthase 2 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 293 | 774 | 0 |
| NIILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPRYGNYAEPQDLGVRKGYKVDGQHMEVAFFHSYIDGVDFVFIDSPMFRHMENNIYGGKRE DILKRMVLFCKAAVEAPWNVPCGGICYGDGNLAFIANDWHTALLPVYLKAYYRDNGLMIYARSILVIHNIAHQGRGPVSDFSFVDLPQHYLDLFKLYDPI GGEHFNIFAAGLKTADRVVTVSHGYAWEVKTVDGGWGLHGIINENDWKLRGIVNGIDNTDWNPQFDIFLRSDGYTNYSLETLKTGKPQCKAALQKELGLP IREDVPLIGFIGRLDHQKGVDLIAEAIPWMINQDVQLVMLGTGRPDLEQMLREFEHQHRDKVRGWVGFSVQTAHRITAGVDILLMPSRFEPCGLNQLYAM NYGTVPVVHAVGGLKDTVHPFNPYEESGLGWTFDSADTGKLIHALGNCIYTYRDFKQSWEGIQRRGMMQDLSWDKAAQNYEE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1048 Download |
| MASIKSLPFV IETKAESSVL LHSDNTRQLR LPFFTHRRRR AGEVSLISGS ASGYSQAVGL 60 CSGQISSCTK GQVWRVKPVR AIRKVSVDGE EDNGESEDAL QATIEKSKKV LAMQRGLLQQ 120 IAERRKLVSS ITSDIDEEEE EEEEDGSFEQ GDSFSDVGSS SSDGNDTVEE QNSSIASSSY 180 AHSNGEKELE TVPSAVSRGF SEIEKEHEET VPLNKAPHEV ESIKHGNKTS AKSEWSDSLP 240 SFISTTMEPS SVKDEEEHVD LKEPSPQQVN VGAADPTIDN VKPPPLAGPN VMNIILVAAE 300 CAPWSKTGGL GDVAGALPKA LARRGHRVMV VAPRYGNYAE PQDLGVRKGY KVDGQHMEVA 360 FFHSYIDGVD FVFIDSPMFR HMENNIYGGK REDILKRMVL FCKAAVEAPW NVPCGGICYG 420 DGNLAFIAND WHTALLPVYL KAYYRDNGLM IYARSILVIH NIAHQGRGPV SDFSFVDLPQ 480 HYLDLFKLYD PIGGEHFNIF AAGLKTADRV VTVSHGYAWE VKTVDGGWGL HGIINENDWK 540 LRGIVNGIDN TDWNPQFDIF LRSDGYTNYS LETLKTGKPQ CKAALQKELG LPIREDVPLI 600 GFIGRLDHQK GVDLIAEAIP WMINQDVQLV MLGTGRPDLE QMLREFEHQH RDKVRGWVGF 660 SVQTAHRITA GVDILLMPSR FEPCGLNQLY AMNYGTVPVV HAVGGLKDTV HPFNPYEESG 720 LGWTFDSADT GKLIHALGNC IYTYRDFKQS WEGIQRRGMM QDLSWDKAAQ NYEEDPLVHI 780 DFGWCVDDEN NIDRDVCPPQ YLPMGETGGG VWLSESFQEP HVGGDRLGGV WKPEDSSLLR 840 YDVGIMTNGC MLEVQNRVLG LVVGVGFHNV STATATATAA SVWAWIDGGK AWLEKVSLRR 900 PAILMQIAVL PIGKFMAKTL PNKDFNLLGF KFNLNPGPFN MKEHVVITIF ANCGVSSGGG 960 DAYSTGVITV SFLWDSSGSS SEREKESTGS EGYHLAVLFY FYATATNQVW PTILCKIAGI 1020 LISLYDDGIL LSAQGLPDGD EEGVQQA* 1080 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 6.0e-79 | 292 | 774 | 506 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 2.0e-134 | 292 | 774 | 503 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 2.0e-163 | 292 | 774 | 498 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 0 | 292 | 774 | 487 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 293 | 774 | 489 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| GO:0055085 | transmembrane transport |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 292 | 773 | 10 | 505 | A Chain A, Crystal Structure Of A Putative Peptidase (Bf3526) From Bacteroides Fragilis Nctc 9343 At 2.17 A Resolution |
| PDB | 3vue_A | 0 | 292 | 773 | 10 | 505 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 292 | 774 | 1 | 471 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 292 | 774 | 1 | 471 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 292 | 774 | 1 | 471 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
|---|
 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
