Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna04817.1-v1.0-hybrid |
Family | GH35 |
Protein Properties | Length: 847 Molecular Weight: 92072 Isoelectric Point: 7.0221 |
Chromosome | Chromosome/Scaffold: 4 Start: 21373037 End: 21378764 |
Description | beta-galactosidase 8 |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 37 | 340 | 0 |
LVIDGKRRVLVSGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVRGQYNFEGRNDLVGFVKAVAEAGLYVHLRIGPYVCAEWNYGGFPLWLH FIPGIKLRTDNEPYKAEMQRFTAKIVEMMKNEKLYASQGGPIILSQIENEYGNIDKAYGPAAKTYINWAANMAVSLDTGVPWVMCQQADAPSSVINTCNG FYCDQFSPNSNSTPKIWTENWSGWFLSFGGAVPQRLVEDLAFAVARFYQRGGTFQNYYMYHGGTNFGRSSGGPFIATSYDYDAPLDEYGLLRQPKWGHLK DVHK |
Full Sequence |
---|
Protein Sequence Length: 847 Download |
MAVAMRGVEF KLVVLLVVGV LATASYCTTV SYDHRALVID GKRRVLVSGS IHYPRSTPEM 60 WPDLIQKSKD GGLDVIETYV FWNLHEPVRG QYNFEGRNDL VGFVKAVAEA GLYVHLRIGP 120 YVCAEWNYGG FPLWLHFIPG IKLRTDNEPY KAEMQRFTAK IVEMMKNEKL YASQGGPIIL 180 SQIENEYGNI DKAYGPAAKT YINWAANMAV SLDTGVPWVM CQQADAPSSV INTCNGFYCD 240 QFSPNSNSTP KIWTENWSGW FLSFGGAVPQ RLVEDLAFAV ARFYQRGGTF QNYYMYHGGT 300 NFGRSSGGPF IATSYDYDAP LDEYGLLRQP KWGHLKDVHK AIKLCEPAMV ATDPTISSLG 360 QNIEAAVYKT GSVCSAFLAN VDTKSDATVT FNGNSYQLPA WSVSILPDCK NVVINTAKVC 420 PLSLYVHDFL QRCSEKSDVE PTEAVGSGWS WINEPVGISK GDAFTRVGLL EQINTTADKS 480 DYLWYSTSID VKGGYKADLH VQSLGHALHA FVNGKLAGSE TGNSGNAKVS VEIPVEFASG 540 KNTIDLLSLT VGLQNYGAFF DLVGAGITGP VQLKGSANGT TIDLSSQQWT YQIGLKGEDE 600 DLPSGSSQWI SQPTLPKNQP LTWGSNIFQT QFDAPGGSNP VALDFTGMGK GEAWVNGQSI 660 GRYWPTNVAP KTGCTDCNYR GAYSADKCRK NCGMPSQKLY HVPRSWMKSS GNTLVLFEEV 720 GGDPTQLSFA TRQVESLCSH VSESHPSPVD MWSSDSKAGS KSRPRLSLEC PFPNQVISSI 780 KFASYGRPSG TCGSFSHGLC RSSRALSIVQ KACVGSKSCS IEVSTNTFGD PCKGLAKSLA 840 VEASCK* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 3.0e-8 | 52 | 207 | 173 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 5.0e-25 | 768 | 845 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 3.0e-25 | 30 | 332 | 352 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 5.0e-173 | 36 | 342 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 29 | 845 | 829 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 29 | 721 | 7 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4e-39 | 30 | 411 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4e-39 | 30 | 411 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |