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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna05164.1-v1.0-hybrid |
Family | GH3 |
Protein Properties | Length: 894 Molecular Weight: 97002.4 Isoelectric Point: 8.259 |
Chromosome | Chromosome/Scaffold: 4 Start: 22696276 End: 22705796 |
Description | beta-xylosidase 1 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 79 | 326 | 0 |
AVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPGATSFPQVITTAASFNQSLWQEIGQVVSDEARAMYNGGQAGLTYWSPNVNIFRDPRWGRGQETPGE DPVLAAKYAASYVKGLQGDGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNARVSKQDLADTYDVPFRGCVLEGKVASVMCSYNQVNGKPTCADPDLLKN TIRGEWKLNGYIVSDCDSVGVFYDQQHYTRTPEEAAAEAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 894 Download |
MASGYNNKLS LLALVLCVSA LLFNLVHARP PFACDPRNPL TRGFKFCRTR VPVHVRVQDL 60 IGRLTLQEKI RLLVNNAIAV PRLGIQGYEW WSEALHGVSN VGPGTKFGGA FPGATSFPQV 120 ITTAASFNQS LWQEIGQVVS DEARAMYNGG QAGLTYWSPN VNIFRDPRWG RGQETPGEDP 180 VLAAKYAASY VKGLQGDGAG NRLKVAACCK HYTAYDLDNW NGVDRFHFNA RVSKQDLADT 240 YDVPFRGCVL EGKVASVMCS YNQVNGKPTC ADPDLLKNTI RGEWKLNGYI VSDCDSVGVF 300 YDQQHYTRTP EEAAAEAIKA GLDLDCGPFL AIHTEGAIKA GLLPEINVDY ALANTLTVQM 360 RLGMFDGEPS AQQYGNLGPR DVCTLAHQEL ALEAARQGIV LLQNNGHTLP LSTVRHHTVA 420 VIGPNSDVTE TMIGNYAGVA CGYTTPLQGI GRYTKTIHQQ GCTNVACTTN QLFGAAEAAA 480 RQAEATVLVM GLDQSIEAEF RDRTDLVMPG HQQELVSRVA QASRGPTILV LMSGGPIDMS 540 FAKNDPKIGA IIWVGYPGQA GGTAMADVLF GGKLPMTWYP QDYVSKVPMT NMAMRAGRGY 600 PGRTYRFYKG PVVFPFGLGL SYTTFRHSLA QVPTSVSVPL TSLSATTNST MLSSAVRVSH 660 TNCNPLSLAL HVDVKNTGAR DGTHTLLVFS SPPSGKWAVN KQLVGFHKVH IVAGSQKRVK 720 FDVHVCKHLS VVDQFGIQRI PIGEHKLQIG DLEHHISVEA NNLDGDGCPE RLATESISAV 780 EEVSIFLLHL SLCSSTRRAK MSDCNRGQDY FSVQQHEAPT AADKYGGLAP KKKPLITKDH 840 ERAYFDSADW ALCKQGAGVN PKSTASVETL RPKLQRTPHQ QLPPRRPACT TSE* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 8.0e-52 | 399 | 624 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 1.0e-61 | 75 | 463 | 395 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-64 | 60 | 358 | 306 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 1.0e-73 | 115 | 723 | 669 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 28 | 760 | 758 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 115 | 723 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3u48_A | 0 | 115 | 723 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3u4a_B | 0 | 115 | 723 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3u4a_A | 0 | 115 | 723 | 91 | 696 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 2x41_A | 8.99998e-41 | 56 | 760 | 3 | 709 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |