Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna05463.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 593 Molecular Weight: 65459.1 Isoelectric Point: 6.0361 |
Chromosome | Chromosome/Scaffold: 6 Start: 27783446 End: 27786269 |
Description | pectin methylesterase 1 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 278 | 577 | 0 |
VTVAQDGTGDFKTIQEAVNAVPKKNLTRFVIYVKQGTYLENVIMDKNKWNVMMYGDGKAKTIVSGKLNFVDGTATFNTATFGVYFALPAVAGKGFIAKDM GFINTAGAAKHQAVAFRSGSDQSVYYRCSFDAFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQNCNIQPRQPMPNQFNTITAQGKKDPNQNSGISI QKCTIFPLESNMTAQTYLGRPWKEFSTTIFMQSTIGSILNPLGWIEWVSNVDPPSTIFYAEYQNSGPGSSVDKRVTWAGYRPSLTDVEAAKFTVESFIQG |
Full Sequence |
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Protein Sequence Length: 593 Download |
MDSMTSFKGY GKVDELEEQA FRRKTRKRFI IVIVSIIVLV AVIIGAVTGT VIHNRNSSSS 60 PSPTEPATQL TPSSSLKAVC DVTLYPNSCF SSISSLKNSN TTDPEALFKL SLHVAIDEVS 120 KLKDLPSKLK SKIGNDTKLN EAFKVCETLF DDAVDKLNDS LSSMEIGSSD KLLSQTKIND 180 LKTWITASMT DQDTCLDSLE ELNSTLVQEF RDAMQNSTEY ASNSLAIVAK ILDLLSRMGI 240 PVHRRLLGYE ESSVPEFPGW VSPGDRRLLQ EQNLTAHVTV AQDGTGDFKT IQEAVNAVPK 300 KNLTRFVIYV KQGTYLENVI MDKNKWNVMM YGDGKAKTIV SGKLNFVDGT ATFNTATFGV 360 YFALPAVAGK GFIAKDMGFI NTAGAAKHQA VAFRSGSDQS VYYRCSFDAF QDTLYAHSNR 420 QFYRDCDITG TIDFIFGNAA VVFQNCNIQP RQPMPNQFNT ITAQGKKDPN QNSGISIQKC 480 TIFPLESNMT AQTYLGRPWK EFSTTIFMQS TIGSILNPLG WIEWVSNVDP PSTIFYAEYQ 540 NSGPGSSVDK RVTWAGYRPS LTDVEAAKFT VESFIQGSEW LPQTNVNFET SL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02745 | PLN02745 | 3.0e-157 | 76 | 581 | 522 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 8.0e-160 | 66 | 592 | 540 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 0 | 1 | 592 | 598 | + pectinesterase | ||
PLN02468 | PLN02468 | 0 | 7 | 592 | 591 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 277 | 578 | 306 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 274 | 592 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 277 | 592 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 7e-20 | 288 | 582 | 18 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 7e-20 | 288 | 582 | 18 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 7e-20 | 288 | 582 | 18 | 339 | A Chain A, Pectin Methylesterase From Carrot |