Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna05465.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 534 Molecular Weight: 58107.9 Isoelectric Point: 9.0545 |
Chromosome | Chromosome/Scaffold: 6 Start: 27794056 End: 27798509 |
Description | pectin methylesterase 3 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 222 | 517 | 0 |
NVIVAADGSGNYKTVSEAVAAAPSKSTSRYVIRIKAGVYRENVDVPKAKTNIMFLGDGRTTTIITGSRNVVDGDTTFNSATVAAVGAGFLARDITFQNTA GPSKHQAVALRVGSDLSAFYRCDILAYQDSLYVHSNRQFFEGCFIAGTVDFIFGNAAVVLQNCDIHARKPNSGQKNMLTAQGRTDPNQNTGIVIQKSRIG ATSDLQAVKGSFKTYLGRPWKEYSRTVIMQSSITDIIDPAGWYEWSGTFALDTLFYAEYANTGAGASTSNRVTWKGYKVITSATEAQAFTPGNFIA |
Full Sequence |
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Protein Sequence Length: 534 Download |
MATIKEFMAR VSQSKSHKKL FLAFIATVLL VAAVIGIATG VQNKNSNSDN ETLSAAHAIH 60 NFFTIKKLIK KLVKSLTKRE RCALHDCLET IDETLDELHE AVKDLFQYPS INKTLTAHAD 120 DLKTLISSAI TNQETCLDGF SHAEADKIVR KSLEKGQKYV EKLCSNALAM IKNMTDNDIA 180 NEMKAMSSTT NRKLKEERSE GWPEWLSAAD RHLLQSSTVT PNVIVAADGS GNYKTVSEAV 240 AAAPSKSTSR YVIRIKAGVY RENVDVPKAK TNIMFLGDGR TTTIITGSRN VVDGDTTFNS 300 ATVAAVGAGF LARDITFQNT AGPSKHQAVA LRVGSDLSAF YRCDILAYQD SLYVHSNRQF 360 FEGCFIAGTV DFIFGNAAVV LQNCDIHARK PNSGQKNMLT AQGRTDPNQN TGIVIQKSRI 420 GATSDLQAVK GSFKTYLGRP WKEYSRTVIM QSSITDIIDP AGWYEWSGTF ALDTLFYAEY 480 ANTGAGASTS NRVTWKGYKV ITSATEAQAF TPGNFIAGGS WLSATGFPFT LGL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 2.0e-168 | 83 | 533 | 469 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 3.0e-172 | 79 | 533 | 459 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02313 | PLN02313 | 0 | 1 | 533 | 589 | + Pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 222 | 518 | 297 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 79 | 533 | 457 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 215 | 533 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 219 | 533 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 7e-24 | 220 | 490 | 3 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 7e-24 | 220 | 490 | 3 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 7e-24 | 220 | 490 | 3 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |