Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna05501.1-v1.0-hybrid |
Family | GH5 |
Protein Properties | Length: 374 Molecular Weight: 42333.3 Isoelectric Point: 5.4287 |
Chromosome | Chromosome/Scaffold: 6 Start: 28042669 End: 28044171 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 2 | 327 | 6.8e-35 |
NGRSFYLNGFNAYWMMYMASDPYTRAKVTSVFQQASRYGMNIARTWAFSDGVSYRPLQSSPGSYNEDMFKGLDFVISEARNYGVHVILSLVNNFDDYGGR KQYVQWAKERGQAINNDDDFYNNTVVKGYYKDHVKTVLTRINSITRVAYKDDTTIFAWELMNEPRCQLDPSGNLLQQWVKEMAAHVKSIDSNHLLEIGLE GFYGGTTPEKKQFNPSNLEYGSDFIANNLIPEIDFASIHIYAEQWLQGASEEAQADFVDKWVRVHIEDCNSVVRKPLIIGEFGKSYKLPGYTVEKRNTYF GKLYDVIYGSASSDGACAGGLFWQLL |
Full Sequence |
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Protein Sequence Length: 374 Download |
MNGRSFYLNG FNAYWMMYMA SDPYTRAKVT SVFQQASRYG MNIARTWAFS DGVSYRPLQS 60 SPGSYNEDMF KGLDFVISEA RNYGVHVILS LVNNFDDYGG RKQYVQWAKE RGQAINNDDD 120 FYNNTVVKGY YKDHVKTVLT RINSITRVAY KDDTTIFAWE LMNEPRCQLD PSGNLLQQWV 180 KEMAAHVKSI DSNHLLEIGL EGFYGGTTPE KKQFNPSNLE YGSDFIANNL IPEIDFASIH 240 IYAEQWLQGA SEEAQADFVD KWVRVHIEDC NSVVRKPLII GEFGKSYKLP GYTVEKRNTY 300 FGKLYDVIYG SASSDGACAG GLFWQLLAQG MDNVRDGYDV VLEESPSTAS VIAQQSHKLT 360 ELTRHDSNVT KTT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 7.0e-5 | 2 | 288 | 291 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 8.0e-26 | 1 | 339 | 339 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 1 | 363 | 16 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 1 | 351 | 22 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 1 | 351 | 22 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 1 | 351 | 22 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 1 | 351 | 22 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
Sequence Alignments (This image is cropped. Click for full image.) |
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