| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna05562.1-v1.0-hybrid |
| Family | GH3 |
| Protein Properties | Length: 1063 Molecular Weight: 116736 Isoelectric Point: 6.0812 |
| Chromosome | Chromosome/Scaffold: 1 Start: 15866481 End: 15873037 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH3 | 76 | 340 | 0 |
| GIPRLGIPPYEWWSESLHGIATNGPGVSFNGSIASATSFPQVIVTAAAFNRTLWNLIGSAIAVEARAMYNFGQAGLTFWAPNINIFRDPRWGRGQETPGE DPMVASAYAVEFVKGFQGGSWGGGSGVRNGFGGRRVLEESDGLMLSACCKHFTAYDLEMWGKYSRYSFNAVVSEQDLEDTYQPPFRSCIQQGKASCLMCS YNAVNGVPACADKDLLDKVREEWGFKGYITSDCDAVATVFEYQNYTKTIEDAVADVLKAGTDINC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1063 Download |
| MSPNNWRPSS SLFLLLLQFI ISSSNSHPQF PCSQPHHNTL YPFCNTSLPT STRAQSLVSL 60 LTLNEKIQQL SNSASGIPRL GIPPYEWWSE SLHGIATNGP GVSFNGSIAS ATSFPQVIVT 120 AAAFNRTLWN LIGSAIAVEA RAMYNFGQAG LTFWAPNINI FRDPRWGRGQ ETPGEDPMVA 180 SAYAVEFVKG FQGGSWGGGS GVRNGFGGRR VLEESDGLML SACCKHFTAY DLEMWGKYSR 240 YSFNAVVSEQ DLEDTYQPPF RSCIQQGKAS CLMCSYNAVN GVPACADKDL LDKVREEWGF 300 KGYITSDCDA VATVFEYQNY TKTIEDAVAD VLKAGTDINC GTYLVRNTLS TIKQGKVQEE 360 DIDRALLNLF SVQLRLGLFD GDPIKGQYGR LGPQDVCTSE HKNLALEAAR QGIVLLKNDK 420 KFLPLNKGVD FSLAVIGPLA NNASLLGGGY TGIPCNPKTP FEGLQEYRKG TSYTAGCHDV 480 PCDSDTGFKE AIHAAKEADF SVIVVGLDAS QEREDHDRVS LLLPGKQMAL VSSVAAASKN 540 PVILVLAGGG PLDVSFAKKD PRIASILYIG YPGETGGRAL SEIIFGDFNP SGRLTMTWYF 600 ESFTNIPMND MNMRADPSRG YPGRTYRFYT GNRVYGFGHG LSYTNFTYNI VSAPTKLSIQ 660 TPFKVYSIKN VLHQAGDANG YLRLDEVSSC DSLRFSVEIV VMNVGDMDGS HTVMLYSRVP 720 EIMKGAPKQQ LIGFNQVHTI SSKSTPTSIL VDPCTHLSFA NDYGERSSDL VETSPHRQTF 780 VYSVSDDTPA AIMADDQNDV KEEVALADVA PFDPSKKKKK KKVVIEDPAD DSVDKLAEKT 840 ESLAVSEGQD SSFTGLKKKK KKPIETSILN EETGDVPEDL DEHPAEDEEG EGIILGASNP 900 WEGSDRDYEY EELLGRVYNI LRENNPELAG DRRRTVMRPP QVLREGTKKT VFVNFMDLCK 960 TMHRQPEHVQ NFLLAELGTS GSLDGQQRLV VKGRFAPKNF EGILRRYVNE YVICLGCKSP 1020 DTILSKENRL YFLRCEKCGS GRSVAQIKQG FVARVGRRNA GA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-57 | 54 | 365 | 321 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| pfam01873 | eIF-5_eIF-2B | 2.0e-59 | 922 | 1043 | 123 | + Domain found in IF2B/IF5. This family includes the N terminus of eIF-5, and the C terminus of eIF-2 beta. This region corresponds to the whole of the archaebacterial eIF-2 beta homologue. The region contains a putative zinc binding C4 finger. | ||
| smart00653 | eIF2B_5 | 4.0e-62 | 932 | 1040 | 109 | + domain present in translation initiation factor eIF2B and eIF5. | ||
| PRK15098 | PRK15098 | 1.0e-68 | 112 | 737 | 666 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 27 | 766 | 743 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003743 | translation initiation factor activity |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0006413 | translational initiation |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 112 | 749 | 91 | 701 | A Chain A, Aquifex Aeolicus Amylomaltase |
| PDB | 3u48_A | 0 | 112 | 749 | 91 | 701 | A Chain A, Aquifex Aeolicus Amylomaltase |
| PDB | 3u4a_B | 0 | 112 | 749 | 91 | 701 | A Chain A, Aquifex Aeolicus Amylomaltase |
| PDB | 3u4a_A | 0 | 112 | 749 | 91 | 701 | A Chain A, Aquifex Aeolicus Amylomaltase |
| PDB | 2x41_A | 1e-37 | 53 | 761 | 3 | 683 | A Chain A, Aquifex Aeolicus Amylomaltase |
