| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna05617.1-v1.0-hybrid |
| Family | GT5 |
| Protein Properties | Length: 1377 Molecular Weight: 154721 Isoelectric Point: 8.2748 |
| Chromosome | Chromosome/Scaffold: 1 Start: 15733161 End: 15745218 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 912 | 1360 | 0 |
| HIVHICTEMEPLVSVGSLASYVTGLSRALQRKGHLVEVILPKYSSLDLDEVHGLQEIEAESFSYFNGQLHGNRIWTGVVYGIGVTLIQPLEYSEFFNREK VYGYSDDFERFTYFSRASLDYIVKCGKQPDVIHIHNWETAIIGPLFWDIFAKQCLEHPDKLALCGLDPSSLHRPDRLQDNTKSHLVNILKGGVVYSNKVA IMSSILSKGRVIHNLSHGLDPTLNIHKNKLIVSPCGFDNSTWDPSKDNFIPRNFSVEDMEGKTVCKAALQQHLGLSEHASSILIGCIVSEVFDVDLENLW AAIMKASKTDVQFVIMGTSKISSIHKLGSLQESLKDEHVKFVNDSDETITHLVFAGSDIILCQSFHDPVLQVPLKALKYGTAPIALNSSHDNFRNFAEHD YETTNFSRFVSSTFGNMSISEALNEMKNHPWKWKRKILDAMEMDFSWDA | |||
| Full Sequence |
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| Protein Sequence Length: 1377 Download |
| MRVQVSSDKK KSQGAIGFDA AVCVYRFWGT QCEEDTLLLL LIKKEVQTLL SILIASSSLN 60 NCPLSIASGV KSEPDKIRVW DLSHRLLRGF AIRCETTSFC DWRFGFGIGR KNVYPEFVMG 120 YESYDRQRHD RRVEEYDDYE YEGDGYGYEE EGDEYEDEEE EEEEEEEDAP RPTKEALEFL 180 ELRQRLKEQI RRDMKRKEGG RGNSDDRKKL PYDKSFGSFF GPSQPVIADR VIQESKSLLE 240 TRHLASRATN SVHPNKKNSG STSSGSKPVA HTQKPNVINE QKNIVQKRKD TRDYAFLFSE 300 DAELPAPAKD RPPRSDSAPT SEVRSSQTVM KSKQPLVNNS RPLHGGQDNG RSIHGRDSGR 360 PVQGSRDNGR PVHGSRDNRA VHGSHDNGRP VHGSRDSGRP VQGSRDSGRP VQGSRDSGRP 420 VQGSRDSGRP VQGSRENGRP VHGSHDNGRP VMSGHDERKA IPTNGHMHSK VGSNRPSSAS 480 SRPGSTSMDS RKQLGSNNAN GPGRPLVPKG LPSKMPASTL ERRVSAPGLK NNMSSLQKAP 540 SSKSQSSLLK QPLQQRKDVR EPYKPSMLSK QSTGLSKHQI HKPQMHKQVP SRPMSQEYRP 600 KKRPASGFAD DEYDPEDGDI SSMIRNMFGY NPNKFADDDD VSDMEAGFED IQREERRSAK 660 IARMEDEEQA RLIEEEERRE RLAAKMRKQK KLKRNGSQIL VTASREVTPE AFRRRSMKAA 720 LLSTAIPWQP QLHLKPLKPA GAPLCCSKVN GASFSSSQIK LQAGEDAEVP RSPIQPEGAK 780 ETDIWRLFRE AQKNILHLNQ HRLKAVEDLN KTNSEKQLLV DKIEQLELEK QQASVAKPPD 840 RLSSCWEVLL RIDSMVLTGM IAAGEASDLR RLVMDNKESL AEVFNGTLQK TEGQLLAELR 900 HFYARSRRNG FHIVHICTEM EPLVSVGSLA SYVTGLSRAL QRKGHLVEVI LPKYSSLDLD 960 EVHGLQEIEA ESFSYFNGQL HGNRIWTGVV YGIGVTLIQP LEYSEFFNRE KVYGYSDDFE 1020 RFTYFSRASL DYIVKCGKQP DVIHIHNWET AIIGPLFWDI FAKQCLEHPD KLALCGLDPS 1080 SLHRPDRLQD NTKSHLVNIL KGGVVYSNKV AIMSSILSKG RVIHNLSHGL DPTLNIHKNK 1140 LIVSPCGFDN STWDPSKDNF IPRNFSVEDM EGKTVCKAAL QQHLGLSEHA SSILIGCIVS 1200 EVFDVDLENL WAAIMKASKT DVQFVIMGTS KISSIHKLGS LQESLKDEHV KFVNDSDETI 1260 THLVFAGSDI ILCQSFHDPV LQVPLKALKY GTAPIALNSS HDNFRNFAEH DYETTNFSRF 1320 VSSTFGNMSI SEALNEMKNH PWKWKRKILD AMEMDFSWDA ECCDIHTSAY TSLKKL* 1380 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02939 | PLN02939 | 0.0001 | 783 | 828 | 46 | + transferase, transferring glycosyl groups | ||
| PRK00654 | glgA | 7.0e-71 | 912 | 1360 | 501 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 3.0e-74 | 912 | 1360 | 502 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 7.0e-80 | 911 | 1359 | 492 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PLN02939 | PLN02939 | 1.0e-106 | 777 | 1360 | 630 | + transferase, transferring glycosyl groups | ||
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0.000000000000006 | 911 | 1300 | 10 | 433 | A Chain A, Rhamnogalacturonan Lyase From Aspergillus Aculeatus |
| PDB | 3vue_A | 0.000000000000006 | 911 | 1300 | 10 | 433 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3guh_A | 0.00000000000002 | 913 | 1358 | 3 | 462 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 2r4u_A | 0.00000000000002 | 913 | 1358 | 3 | 462 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 2r4t_A | 0.00000000000002 | 913 | 1358 | 3 | 462 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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