Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna05734.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 401 Molecular Weight: 43599.9 Isoelectric Point: 6.9346 |
Chromosome | Chromosome/Scaffold: 1 Start: 14792594 End: 14794623 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 313 | 395 | 2.5e-33 |
WCVAKPTVPAETLQEAVDYACGAGGADCEEIMPSGNCYYPESVVAHASYAFNSYWQKNKRNGGTCSFGGTAMLINSDPSYELC |
Full Sequence |
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Protein Sequence Length: 401 Download |
MLKMVWLIFF QLMFLGLSGA TQESAQVLTL FETSHEVFQG SNLPIAVSVR ELSEVSTSVL 60 MAETWLRTHV LGHYPSIPIT TILVGDTILC SEHHNNLSLV LLALKNIHHS LTRWGLEKDI 120 KVSAAFSSGC LGKSSERFVR PILEFLQDTN STYSVNPPPK VSPFSDETIQ LVSSHSETLK 180 KLGFLGLRNI NVIVTNPKEA KPRTRKLSSI DPFPTRPNPQ PITSDPPLHS SVGFSVPANV 240 AKNPQPPQAQ LASPAPSQTA SPPIPETASP PVEMWFPHAP EVSPVQATPS PSAYVMPPCR 300 APAPEFRPVH KLWCVAKPTV PAETLQEAVD YACGAGGADC EEIMPSGNCY YPESVVAHAS 360 YAFNSYWQKN KRNGGTCSFG GTAMLINSDP SYELCRFIIT * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 6.0e-10 | 36 | 162 | 140 | + Glycosyl hydrolases family 17. | ||
pfam07983 | X8 | 3.0e-28 | 312 | 384 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-42 | 312 | 397 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-17 | 313 | 397 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2cyg_A | 0.000000007 | 32 | 162 | 37 | 178 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 4gzj_A | 0.00005 | 38 | 150 | 45 | 170 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 4gzi_A | 0.00005 | 38 | 150 | 45 | 170 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
PDB | 3ur8_B | 0.00005 | 38 | 150 | 45 | 170 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |