CAZyme Information

Basic Information
SpeciesFragaria vesca
Cazyme IDmrna05759.1-v1.0-hybrid
FamilyGH43
Protein PropertiesLength: 530 Molecular Weight: 60632.3 Isoelectric Point: 7.5066
ChromosomeChromosome/Scaffold: 1 Start: 14961414 End: 14967412
DescriptionArabinanase/levansucrase/invertase
View CDS
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH432144376.8e-34
  ILYDEKSGTYYWYGEYKDGPTYHAHKKGAARVDILGVGCYSSKDLWKWNNEGIVLAAEKTNETHDLHELNVLERPKVIYNHKTAKYVMWMHIDDVNYTKA
  SVGVAISDYPTGPFDYLYSKRPHGFDSRDMTVFKDDDGIAYLIYSSDDNSELHIGPLTEDYLDVTNIVRRILVGQHREAPALFKHDGTYYMITSGCTGWA
  PNEAMAHAAESIMGPWETMGNPCI
Full Sequence
Protein Sequence     Length: 530     Download
MASAYSQSIQ EFLNLYPTLQ SLAYCTFVKD GISEVVRYHC RPIKLAFRLL WASILSLVIF    60
TVFLELLLVA RALQEKGGSR CSISAVVWSL VGCLLMFHLY SLVHHKDGMG REIQFRASVH    120
PQLHELEKVE EESIRMPPPR KRSPRAAKRK PKRPTTIIDE FLDENSQIRH VFFPDQKLAI    180
DPLKDAGNDS YYYYPGRIWL DTEENPIQAH GGGILYDEKS GTYYWYGEYK DGPTYHAHKK    240
GAARVDILGV GCYSSKDLWK WNNEGIVLAA EKTNETHDLH ELNVLERPKV IYNHKTAKYV    300
MWMHIDDVNY TKASVGVAIS DYPTGPFDYL YSKRPHGFDS RDMTVFKDDD GIAYLIYSSD    360
DNSELHIGPL TEDYLDVTNI VRRILVGQHR EAPALFKHDG TYYMITSGCT GWAPNEAMAH    420
AAESIMGPWE TMGNPCIGGN KMSRLATFFA QSTFVIPLPG FPGSFIFMAD RWNPADLRDS    480
RYVWLPLIVG GPVDRPLDYN FGFPLWSRVS IYWHRKWKLP QGWSGWKKM* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd08999GH43_ABN_22.0e-16314435140+
cd08990GH43_AXH_like1.0e-17252433196+
cd09004GH43_bXyl8.0e-21221434228+
cd08978GH_F6.0e-46210487289+
cd08985GH43_63.0e-130207487282+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3vt2_F019648745328A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB3vt2_E019648745328A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB3vt2_D019648745328A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB3vt2_C019648745328A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB3vt2_B019648745328A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
Transmembrane Domains
StartEnd
4769
81103
Hydropathy
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_060_00007.3Aquca_060_00007.1Aquca_060_00007.2
Arabidopsis lyrata906305332819
Arabidopsis thalianaAT5G67540.2AT5G67540.1AT3G49880.1
Brachypodium distachyonBradi2g50980.2Bradi1g71160.1Bradi2g50980.1
Brassica rapaBra024441Bra029980Bra036036
Capsella rubellaCarubv10027885mCarubv10019437m
Citrus clementinaCiclev10025553mCiclev10025552mCiclev10025561m
Citrus sinensisorange1.1g011114morange1.1g012300morange1.1g012453m
Cucumis sativusCucsa.366970.1Cucsa.366990.1
Eucalyptus grandisEucgr.I00703.2Eucgr.I00703.1Eucgr.H02307.1
Glycine maxGlyma05g22470.3Glyma17g17390.3Glyma17g17390.2Glyma17g17390.1Glyma05g22470.6
Glyma05g22470.5Glyma05g22470.4Glyma05g22470.2Glyma01g40190.1Glyma11g05100.1
Gossypium raimondiiGorai.011G214500.1Gorai.008G083400.1Gorai.003G030500.1Gorai.003G030500.2
Linum usitatissimumLus10011543Lus10019280
Malus domesticaMDP0000248963MDP0000503275MDP0000406084
Manihot esculentacassava4.1_032973mcassava4.1_007150mcassava4.1_007066m
Medicago truncatulaMedtr5g015460.1Medtr4g097110.1
Mimulus guttatusmgv1a018781mmgv1a005746m
Oryza sativaLOC_Os12g21789.1LOC_Os12g21789.2LOC_Os01g65720.1
Panicum virgatumPavirv00010178mPavirv00067870mPavirv00058950mPavirv00044467m
Physcomitrella patensPp1s410_9V6.1Pp1s16_243V6.1
Phaseolus vulgarisPhvul.003G234900.1Phvul.002G010600.1
Picea abiesMA_181765g0010
Populus trichocarpaPotri.005G148800.1Potri.005G148800.2
Prunus persicappa005306m
Ricinus communis48021.m00001434138.m00001529661.m000924
Setaria italicaSi001388mSi035531m
Selaginella moellendorffii44066110234
Sorghum bicolorSb03g041630.1Sb01g043810.1
Thellungiella halophilaThhalv10004148mThhalv10010347m
Vitis viniferaGSVIVT01000105001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny