Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna05979.1-v1.0-hybrid |
Family | GT4 |
Protein Properties | Length: 721 Molecular Weight: 80447.5 Isoelectric Point: 10.4069 |
Chromosome | Chromosome/Scaffold: 6 Start: 23920615 End: 23924868 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 563 | 689 | 3.7e-25 |
KFLIGSVGSKSNKVAYVKELLSYLSQHSNLSKSVLWTPSTTRVAALYSAADVYVMNSQGLGETFGRVTIEAMAFGLPVLGTDAGGTKEIVDHNVTGLLHP LGHPGTQVLAKNLRLLLKNPELRKQMG |
Full Sequence |
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Protein Sequence Length: 721 Download |
MEEETKGDYK ASRGIGSFKS TLSGRSSPRS SPSFKRLHSS RTPRREARSS GGVQWFRSNR 60 LLFWLLLITL WAYLGFYFQS SWAHSNNKVN FLGVGNEASN DKSDAEQNQR RDLLDSPVKL 120 KNETGQNQPE AGKTIDVVLA KKDDGVASRR SLSSKKKSKK AARGKSHGKP KKTVAIEIHE 180 IEEQEPDIPK TNASYGMLVG PFGSTEDRIL EWNPKTRTGT CDRKGDFSRL VWSRRFLLIF 240 HELSMTGAPL SMMELATELL SCGATVSAIV LSKKGGLMPE LTRRRIKVLE DKADHSFKTA 300 MKQDLVIAGS AVCASWIDQY IDKFPAGASQ IAWWIMENRR EYFDRAKVVL DRVKMLAFLS 360 ESQSKQWLDW CEEEKIKLRS QPAIVPLSIN DELAFVAGIG CSLNTPSSSI EKMLEKMKLL 420 RDAVRKEMGL TDNDMLAISL SSINPGKGQL LVLNSARLVI EEEPQPDNSK IKNSVRKGRV 480 RSALARKHHI RALLQGSNDH SASLNGFPLS TESSVHFKED QKKHLHLHNR FASVDDTDAM 540 NFDVTYKRKV LADNGGTVKQ SAKFLIGSVG SKSNKVAYVK ELLSYLSQHS NLSKSVLWTP 600 STTRVAALYS AADVYVMNSQ GLGETFGRVT IEAMAFGLPV LGTDAGGTKE IVDHNVTGLL 660 HPLGHPGTQV LAKNLRLLLK NPELRKQMGV KGREKVERMY LKRHMYKKFV DVLLKCMRPK 720 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd03800 | GT1_Sucrose_synthase | 1.0e-21 | 604 | 700 | 97 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
COG0438 | RfaG | 2.0e-22 | 562 | 720 | 161 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
TIGR00072 | hydrog_prot | 5.0e-24 | 580 | 711 | 133 | + hydrogenase maturation protease. HycI and HoxM are well-characterized as responsible for C-terminal protease activity on their respective hydrogenase large chains. A large number of homologous proteins appear responsible for the maturation of various forms of hydrogenase. | ||
cd03808 | GT1_cap1E_like | 1.0e-25 | 591 | 711 | 121 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
cd03801 | GT1_YqgM_like | 5.0e-32 | 562 | 713 | 154 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jjm_L | 0.0000000002 | 586 | 718 | 259 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_K | 0.0000000002 | 586 | 718 | 259 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_J | 0.0000000002 | 586 | 718 | 259 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_I | 0.0000000002 | 586 | 718 | 259 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_H | 0.0000000002 | 586 | 718 | 259 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |