Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna06574.1-v1.0-hybrid |
Family | GT47 |
Protein Properties | Length: 486 Molecular Weight: 55486.5 Isoelectric Point: 8.2379 |
Chromosome | Chromosome/Scaffold: 4 Start: 17174377 End: 17175834 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 56 | 399 | 0 |
SCSGRYIYVYDDLPAKFNYDLLSNCKSLSSGTTSDSDDNKNMCPYLVNMGLGPEIESSRGVLANKSWFSTNPYLLEVIFHNRMKQYECLTNISTLASAIY VPYYTGLDASLHLWDTNLTVRDASAKDLLKWISGKSEWKRMWGRDHFMVTGRTSWDFRRTNDSSEWPWGSFLRFLPESKNMSMLSVEGSLWKNDFAIPYP TNFHPAKDSEIIQWQNRMRYLQRPYLFAFVGAPRPGLEKSIRGNLIDQCRASSTCKFVHCGSKGVNCNNPVTVMKVFQSSVFCLQPPGDSHTRRSAFDSM LAGCIPVFFNPGSAYNQYLWHLPDNHSTYSVFIPAKDVNDLKNV |
Full Sequence |
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Protein Sequence Length: 486 Download |
MERILTGKCS REVLLGILVS FCLCFALLFL HHSTPLRFSN WVNILGNRHV HNIFDSCSGR 60 YIYVYDDLPA KFNYDLLSNC KSLSSGTTSD SDDNKNMCPY LVNMGLGPEI ESSRGVLANK 120 SWFSTNPYLL EVIFHNRMKQ YECLTNISTL ASAIYVPYYT GLDASLHLWD TNLTVRDASA 180 KDLLKWISGK SEWKRMWGRD HFMVTGRTSW DFRRTNDSSE WPWGSFLRFL PESKNMSMLS 240 VEGSLWKNDF AIPYPTNFHP AKDSEIIQWQ NRMRYLQRPY LFAFVGAPRP GLEKSIRGNL 300 IDQCRASSTC KFVHCGSKGV NCNNPVTVMK VFQSSVFCLQ PPGDSHTRRS AFDSMLAGCI 360 PVFFNPGSAY NQYLWHLPDN HSTYSVFIPA KDVNDLKNVS IEKRLLGISK EKQLEMRTKV 420 IKLIPKLVYA DPRSSLVTED AFDFAVMGIL ERIENVRQLI REGKDPSIGF ADEDSVKYTF 480 PETLE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-62 | 56 | 399 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |