Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna06678.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 197 Molecular Weight: 20343.9 Isoelectric Point: 4.0687 |
Chromosome | Chromosome/Scaffold: 4 Start: 18077292 End: 18079441 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 33 | 114 | 6.7e-34 |
WCVARSDASNQALQTALDYACASGADCVPIQSDGLCYLPNTIQAHTSYAFNSYYQRKAMAPGSCDFSGTATVAQTDPSYGSC |
Full Sequence |
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Protein Sequence Length: 197 Download |
MAAAPPSLFL FFLLLTTLVC INTTGVEGAT TTWCVARSDA SNQALQTALD YACASGADCV 60 PIQSDGLCYL PNTIQAHTSY AFNSYYQRKA MAPGSCDFSG TATVAQTDPS YGSCVYPSSV 120 STAGGTSTTP NTTPTTTTTI PSPPTTTTTN PTFGNGVVGG LTPVTTPAVP DDSKAASLQF 180 MLPTLISVSF IFYMFF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 5.0e-21 | 32 | 103 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-38 | 32 | 116 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 9e-24 | 29 | 118 | 9 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |