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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna06720.1-v1.0-hybrid |
Family | GH14 |
Protein Properties | Length: 543 Molecular Weight: 59870.4 Isoelectric Point: 6.6397 |
Chromosome | Chromosome/Scaffold: 4 Start: 18702972 End: 18705580 |
Description | beta-amylase 3 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 95 | 502 | 0 |
VGLPLDAVSDCNSVNHARAIAAGLKALKLLGVTGVELPVWWGVVEKDAMGKYEWSAYHSLVEMVQKAGLEVHVSLCFHASNQLKISLPDWVSSLGESQPG IFFKDRSGQQYKECLSLAVDELPVLNGKTPIHVYRDFCESFKASFSPFLGSTITGISVSLGPDGELRYPSHHQSVKRGKIPGVGEFQCFDENMLSGLKQH AEATGNPLWGLGGPHDAPSYDQSPYSNAFFKDHGGSWESPYGDFFLSWYSNQLISHGDRILSLASSTFGETEVTVYGKVPLMYSWYKTRSHPSELTSGFY NTSSRDGYEAVADMFGRNSCKMILPGLDLSDVHQLHESHSSPESLLSQIIMVCRKHRVEISGQNSSVSGAPGGFQQIKKNLLGENGIDLFTYQRMGAYFF SPEHFPSF |
Full Sequence |
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Protein Sequence Length: 543 Download |
MAKNILFEFF SEMEVSLFQS SQVKIGRAEL GNREFGFCKL SGDLRTQISF GRKTSWKNGR 60 VQFTLRAVQS ESIRPVKVPG RVKRSNSNDG VRLLVGLPLD AVSDCNSVNH ARAIAAGLKA 120 LKLLGVTGVE LPVWWGVVEK DAMGKYEWSA YHSLVEMVQK AGLEVHVSLC FHASNQLKIS 180 LPDWVSSLGE SQPGIFFKDR SGQQYKECLS LAVDELPVLN GKTPIHVYRD FCESFKASFS 240 PFLGSTITGI SVSLGPDGEL RYPSHHQSVK RGKIPGVGEF QCFDENMLSG LKQHAEATGN 300 PLWGLGGPHD APSYDQSPYS NAFFKDHGGS WESPYGDFFL SWYSNQLISH GDRILSLASS 360 TFGETEVTVY GKVPLMYSWY KTRSHPSELT SGFYNTSSRD GYEAVADMFG RNSCKMILPG 420 LDLSDVHQLH ESHSSPESLL SQIIMVCRKH RVEISGQNSS VSGAPGGFQQ IKKNLLGENG 480 IDLFTYQRMG AYFFSPEHFP SFAGFVRSLN QLELQSDDLP GEDEATESIH SNSEAGIHMQ 540 AA* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 2.0e-79 | 126 | 412 | 294 | + beta-amylase | ||
PLN02801 | PLN02801 | 4.0e-90 | 91 | 509 | 435 | + beta-amylase | ||
PLN02161 | PLN02161 | 1.0e-96 | 56 | 510 | 478 | + beta-amylase | ||
PLN00197 | PLN00197 | 5.0e-102 | 90 | 511 | 434 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 2.0e-112 | 84 | 511 | 435 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v3i_A | 0 | 91 | 510 | 12 | 442 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1q6g_A | 0 | 91 | 510 | 12 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1q6d_A | 0 | 91 | 509 | 12 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
PDB | 1fa2_A | 0 | 78 | 509 | 3 | 443 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 1uko_D | 0 | 91 | 510 | 12 | 442 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
Sequence Alignments (This image is cropped. Click for full image.) |
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