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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna06887.1-v1.0-hybrid |
Family | AA2 |
Protein Properties | Length: 459 Molecular Weight: 49602.8 Isoelectric Point: 8.5839 |
Chromosome | Chromosome/Scaffold: 4 Start: 19562169 End: 19572282 |
Description | Peroxidase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 52 | 311 | 0 |
AAATDPGIAAALIRLHFHDCFVMGCDASILLDSKPGKPAAEKESMGNKGVQGFEVIDEAKANIEAQCPNTVSCADIITFAARDSVFITGGTYYSAPGGRR DGTVSLVSEVTKNLPDAFLNATQLKTNFARKGLSLKDMVTLSGAHSIGDSHCSSFSKRLYSFNKTHAQDPELDAAYGEYLKSKCPNVKNGVDPVVAFDPL TPTLLDNNYYKNLVGHKGLLATDQELWSSDLTRKMVKYNRNHPGRWGLEFAAAMVKMGSI |
Full Sequence |
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Protein Sequence Length: 459 Download |
MPANLFISCF GLLLILVGLV SSPVASVPLE VGSYRKSCPS AEMIVRDTVK KAAATDPGIA 60 AALIRLHFHD CFVMGCDASI LLDSKPGKPA AEKESMGNKG VQGFEVIDEA KANIEAQCPN 120 TVSCADIITF AARDSVFITG GTYYSAPGGR RDGTVSLVSE VTKNLPDAFL NATQLKTNFA 180 RKGLSLKDMV TLSGAHSIGD SHCSSFSKRL YSFNKTHAQD PELDAAYGEY LKSKCPNVKN 240 GVDPVVAFDP LTPTLLDNNY YKNLVGHKGL LATDQELWSS DLTRKMVKYN RNHPGRWGLE 300 FAAAMVKMGS IDVLVGKQGE IRKNCRAKNI QSPKPSSSFI NLSVSLILHS LKLSPPAASS 360 LQDFVVVAGV INSFIKMQNE EGQITELYIP RKCSATNRLI TSKDHASVQI NIGHLDENGN 420 YTGQFSTFAL CGYVRAQGDA DSGLDRLWQK KKAEVKQQ* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01249 | Ribosomal_S21e | 6.0e-45 | 377 | 457 | 81 | + Ribosomal protein S21e. | ||
pfam00141 | peroxidase | 4.0e-64 | 45 | 198 | 155 | + Peroxidase. | ||
PLN03030 | PLN03030 | 3.0e-84 | 31 | 329 | 304 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 9.0e-164 | 29 | 327 | 299 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0003735 | structural constituent of ribosome |
GO:0004601 | peroxidase activity |
GO:0005622 | intracellular |
GO:0005840 | ribosome |
GO:0006412 | translation |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3hdl_A | 0 | 29 | 329 | 2 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1gx2_B | 0 | 34 | 332 | 8 | 309 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1gx2_A | 0 | 34 | 332 | 8 | 309 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1gwo_A | 0 | 34 | 332 | 8 | 309 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln |
PDB | 1gw2_A | 0 | 34 | 332 | 7 | 308 | A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid |