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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna07045.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 568 Molecular Weight: 62467.7 Isoelectric Point: 8.8112 |
Chromosome | Chromosome/Scaffold: 4 Start: 20129622 End: 20131423 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 257 | 546 | 0 |
DVIVAKDGSGKYKTVNEALKDIPKDNVLKTFVIYIKEGVYSEQVVLDKHMTNVMFIGDGPTKTKITGNKNYADGVQTFKTATVAVIGDYFIAKDIGFENT AGARGHQAVALRVQSDLSIFYNCQIDGYQDTLYTQTHRQFYRDCIISGTIDFIFGDAAAVFQNCKMIVRKPGPNQSCMVTAQGRLDKREPTGIVLQNCTI SGEKGFDAATTMAYLGRPWKMYSRTIVMQSQIDNVINPLGWMEWTGTTNHETSWFGEFSNRGLGAATNQRVKWYKLATPEEAGAFAPGSI |
Full Sequence |
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Protein Sequence Length: 568 Download |
MGGNDRHGKK KKIAIISVSA LILVAMVVAV AVGVTKSHKG GNDEKKPATT SKAIETVCQP 60 TDYKETCQNA LSEKAGNVTD PKELVKIGFQ IAIEKLQEVI NNSDTLKEIA KDNLGNQALQ 120 NCRELIEYSI DDLKRSADKI GPFEVTKLKE YVEDLKVWLS ASLQYEQTCL DGFDNTPGEA 180 GAKMKNFLKT SQELTKNALA MATEIGNLFR TSSLKSQRRL LADTPMDPKK APKIIPSWIE 240 GRKLDIATAN PISLKPDVIV AKDGSGKYKT VNEALKDIPK DNVLKTFVIY IKEGVYSEQV 300 VLDKHMTNVM FIGDGPTKTK ITGNKNYADG VQTFKTATVA VIGDYFIAKD IGFENTAGAR 360 GHQAVALRVQ SDLSIFYNCQ IDGYQDTLYT QTHRQFYRDC IISGTIDFIF GDAAAVFQNC 420 KMIVRKPGPN QSCMVTAQGR LDKREPTGIV LQNCTISGEK GFDAATTMAY LGRPWKMYSR 480 TIVMQSQIDN VINPLGWMEW TGTTNHETSW FGEFSNRGLG AATNQRVKWY KLATPEEAGA 540 FAPGSILLGD KWIMPSGVPY VAGMMRV* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 4.0e-159 | 35 | 564 | 539 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 8.0e-174 | 257 | 550 | 299 | + Pectinesterase. | ||
PLN02217 | PLN02217 | 0 | 36 | 565 | 536 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 0 | 35 | 562 | 541 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 0 | 35 | 564 | 541 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 253 | 564 | 4 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 257 | 564 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 5e-22 | 257 | 525 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 5e-22 | 257 | 525 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-21 | 257 | 525 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |