y
Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna07046.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 560 Molecular Weight: 61450.8 Isoelectric Point: 7.7342 |
Chromosome | Chromosome/Scaffold: 4 Start: 20135898 End: 20137738 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 252 | 538 | 0 |
DVVVAQDGSGKYKTVGEALKDIPKESPKTFVIYIKEGEYKEHVVLEKEMKNVMFIGDGPTKTKITGDKNFADGTHPFRTATVVVIGDYFIAKDMGFENSA GAKGHQAMALRVQSDQSIFYNCQMDGYQNTLFTQTYRQFYRDCTISGAVDIIFGDAAVVFQNCKMIIRKPEGDDKATVTAQERSDKRQPTAIVFQNSTIS ADKEYKDKTAFLGRPAHTYSRTVVMQSQIDDVISPEGWTPWTGQSNTEECWFGEFSNRGSGSATNKRVSWFKMVTRDQADEFSASSL |
Full Sequence |
---|
Protein Sequence Length: 560 Download |
MTGDDRHGKK KKIAIIGVSA IILVAMVVAV AVGVTKSKGH KEDNTPATSS KAIEAVCQPT 60 DFKDTCKTTL AANAGNVTDP KELIKVAMKI ATDKLQEVVD NSQTMHEVVK DPLGDQALQN 120 CKELIQYSIN DIKKAFGNMG PFDVSKVKNY VKELENWLSA SVSYEQTCLD GFNSVKGDAG 180 DKMKNFLKQS QELTKNGLAM ISEISKLMGG AIDIKPQRRL LADGDSSKTS PSWIDGRKLD 240 LATASASSLK PDVVVAQDGS GKYKTVGEAL KDIPKESPKT FVIYIKEGEY KEHVVLEKEM 300 KNVMFIGDGP TKTKITGDKN FADGTHPFRT ATVVVIGDYF IAKDMGFENS AGAKGHQAMA 360 LRVQSDQSIF YNCQMDGYQN TLFTQTYRQF YRDCTISGAV DIIFGDAAVV FQNCKMIIRK 420 PEGDDKATVT AQERSDKRQP TAIVFQNSTI SADKEYKDKT AFLGRPAHTY SRTVVMQSQI 480 DDVISPEGWT PWTGQSNTEE CWFGEFSNRG SGSATNKRVS WFKMVTRDQA DEFSASSLLF 540 GENWIKPSGV PYEAGLMRV* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 4.0e-149 | 6 | 556 | 561 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 8.0e-152 | 252 | 542 | 298 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 7.0e-157 | 35 | 556 | 539 | + Putative pectinesterase/pectinesterase inhibitor | ||
PLN02990 | PLN02990 | 6.0e-159 | 3 | 556 | 577 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02217 | PLN02217 | 4.0e-178 | 4 | 557 | 562 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 246 | 556 | 2 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 252 | 556 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 3e-19 | 253 | 539 | 7 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-19 | 253 | 539 | 7 | 334 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 3uw0_A | 5e-19 | 241 | 517 | 23 | 339 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |