Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna07050.1-v1.0-hybrid |
Family | GT4 |
Protein Properties | Length: 788 Molecular Weight: 89706.6 Isoelectric Point: 6.2862 |
Chromosome | Chromosome/Scaffold: 4 Start: 20160747 End: 20165599 |
Description | sucrose synthase 2 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 545 | 711 | 0 |
DRSKPMVFSMARLDRVKNLTGLVECYGKSTKLREMVNLVVVGGYMDAKNSRDREEMVEIEKMHDLIKKYDLHGQFRWIAAQMNRARNGELYRYIADTRGV FVQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIDPYHPDQVAETLIDFFGQCQKD |
Full Sequence |
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Protein Sequence Length: 788 Download |
MGFLCCVGRY VDQGNGILQP HQIINELDKV IEEDEKMKKL KDSPFSKVLQ SAQEAIVLPP 60 FVTLALRPRP GVWEYVRVNV HELSVDHLSV AEYLGFKEEL LDGEYNDNYL LELDLEPFNS 120 TFPRPTRSSS IGNGVQFLNR HLSSIMFRNK DSLEPLLDFL RTHKHDGHAM MLNDRIQSIP 180 KLQSALAKAE EYVSKFPPMT PYSEFEFELQ GMGFERGWGD TAGRVSEMVH LLLEILQAPD 240 PSTLETFLGR IPMVFNVVIV SPHGYFGQAN VLGLPDTGGQ VVYILDQVRA LENEMLLRIK 300 KQGLDIIPKI LIVTRLLPDA KGTTCNQRLE RVSGTENTYI LRVPFRTKNG ILRKWISRFD 360 VWPYLETFTE DASNEIAAEL QGVPDLIIGN YSDGNLVATL LSNKLGITQC NIAHALEKTK 420 YPDSDIFWKR YEDKYHFSSQ FTADLIAMNS ADFIITSTYQ EIAGSQNNVG QYESHTAFTL 480 PGLYRVVHGV DVFDTKFNIV SPGADMCIYF PYSDSENRLT ALHGSIEELI YGAEQNDKHI 540 GFLADRSKPM VFSMARLDRV KNLTGLVECY GKSTKLREMV NLVVVGGYMD AKNSRDREEM 600 VEIEKMHDLI KKYDLHGQFR WIAAQMNRAR NGELYRYIAD TRGVFVQPAF YEAFGLTVVE 660 AMTCGLPTFA TCHGGPAEII EHGVSGFHID PYHPDQVAET LIDFFGQCQK DPSHWEKISG 720 AGLKRIYGRY TWKIYSERLL TLAGVYGFWK HVSKLERREA RRYLEMFYTL KYRSLVKNIL 780 LAVDEHH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 4.0e-66 | 257 | 743 | 495 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 1.0e-139 | 256 | 741 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 6 | 787 | 782 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 6 | 782 | 778 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 4 | 532 | 529 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 4 | 785 | 30 | 808 | A Chain A, Crystal Structure Of A Hypothetical Protein (bf0371) From Bacteroides Fragilis Nctc 9343 At 1.65 A Resolution |
PDB | 3s29_G | 0 | 4 | 785 | 30 | 808 | A Chain A, Crystal Structure Of A Hypothetical Protein (bf0371) From Bacteroides Fragilis Nctc 9343 At 1.65 A Resolution |
PDB | 3s29_F | 0 | 4 | 785 | 30 | 808 | A Chain A, Crystal Structure Of A Hypothetical Protein (bf0371) From Bacteroides Fragilis Nctc 9343 At 1.65 A Resolution |
PDB | 3s29_E | 0 | 4 | 785 | 30 | 808 | A Chain A, Crystal Structure Of A Hypothetical Protein (bf0371) From Bacteroides Fragilis Nctc 9343 At 1.65 A Resolution |
PDB | 3s29_D | 0 | 4 | 785 | 30 | 808 | A Chain A, Crystal Structure Of A Hypothetical Protein (bf0371) From Bacteroides Fragilis Nctc 9343 At 1.65 A Resolution |
Sequence Alignments (This image is cropped. Click for full image.) |
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