Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna07465.1-v1.0-hybrid |
Family | AA1 |
Protein Properties | Length: 576 Molecular Weight: 63701.4 Isoelectric Point: 9.1052 |
Chromosome | Chromosome/Scaffold: 7 Start: 9675902 End: 9678137 |
Description | laccase 12 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 29 | 561 | 0 |
KAHHHEFVVQATPVKRLCKTHNSITVNGQFPGPTLEVNNGDTLVVKVTNKGRYNVTIHWHGIRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVQGQEGTL WWHAHSSWLRATVYGAIIIHPKQGDSYPFPKPNRQETLLLGEWWDANPIDVVRQATRTGAAPNVSNAYTINGQPGDLYNCSSKGTVIVPIDSGETNLLRV VNAALNQPLFFSVANHKLTVVGADASYTKPFTTKVLMLGPGQTTDVLISGDQQPSRYYMAAHAYFSAQNAPFDNTTTTAILEYKSVRCNNTTSCKKSKPI MPQLPAFNDTNTAEVFTRSFRSPRKVEVPTEIDENLFFTIGLGLNKCPKHFRSRRCQGPNGTRFAASMNNVSFVLPNNMSILQAYQQNIPGVYTSDFPAN PPKKFDYTGNVSRSLWQPSFGTKGYKLKYGSRVQVVLQDTSIVTPENHPIHLHGYDFYILAQGFGNFNAKTDTKKFNLVDPPLRNTVSVPANGWAVIRFV ADNPGAWLLHCHLDVHINWGLGMFFLVDNGVGE |
Full Sequence |
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Protein Sequence Length: 576 Download |
MEAPSSILLL GLCLLFASSA MTSTLAEPKA HHHEFVVQAT PVKRLCKTHN SITVNGQFPG 60 PTLEVNNGDT LVVKVTNKGR YNVTIHWHGI RQMRTGWADG PEFVTQCPIR PGGSYTYRFT 120 VQGQEGTLWW HAHSSWLRAT VYGAIIIHPK QGDSYPFPKP NRQETLLLGE WWDANPIDVV 180 RQATRTGAAP NVSNAYTING QPGDLYNCSS KGTVIVPIDS GETNLLRVVN AALNQPLFFS 240 VANHKLTVVG ADASYTKPFT TKVLMLGPGQ TTDVLISGDQ QPSRYYMAAH AYFSAQNAPF 300 DNTTTTAILE YKSVRCNNTT SCKKSKPIMP QLPAFNDTNT AEVFTRSFRS PRKVEVPTEI 360 DENLFFTIGL GLNKCPKHFR SRRCQGPNGT RFAASMNNVS FVLPNNMSIL QAYQQNIPGV 420 YTSDFPANPP KKFDYTGNVS RSLWQPSFGT KGYKLKYGSR VQVVLQDTSI VTPENHPIHL 480 HGYDFYILAQ GFGNFNAKTD TKKFNLVDPP LRNTVSVPAN GWAVIRFVAD NPGAWLLHCH 540 LDVHINWGLG MFFLVDNGVG ELQTIEPPPA DLPRC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 6.0e-56 | 36 | 152 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 2.0e-71 | 46 | 553 | 542 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 5.0e-83 | 19 | 553 | 568 | + oxidoreductase | ||
TIGR03388 | ascorbase | 3.0e-95 | 46 | 553 | 548 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 29 | 575 | 551 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 29 | 553 | 2 | 521 | A Chain A, Hevamine Mutant D125aY183F IN COMPLEX WITH TETRA-Nag |
PDB | 1asq_A | 0 | 29 | 553 | 2 | 521 | A Chain A, Hevamine Mutant D125aY183F IN COMPLEX WITH TETRA-Nag |
PDB | 1asp_B | 0 | 29 | 553 | 2 | 521 | A Chain A, Hevamine Mutant D125aY183F IN COMPLEX WITH TETRA-Nag |
PDB | 1asp_A | 0 | 29 | 553 | 2 | 521 | A Chain A, Hevamine Mutant D125aY183F IN COMPLEX WITH TETRA-Nag |
PDB | 1aso_B | 0 | 29 | 553 | 2 | 521 | A Chain A, Hevamine Mutant D125aY183F IN COMPLEX WITH TETRA-Nag |