Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna07472.1-v1.0-hybrid |
Family | AA1 |
Protein Properties | Length: 575 Molecular Weight: 63570.3 Isoelectric Point: 9.1031 |
Chromosome | Chromosome/Scaffold: 7 Start: 9729218 End: 9731445 |
Description | laccase 12 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 28 | 560 | 0 |
KAHHHEFVIQATPAKRLCKTHNSITVNGQFPGPTLEVNNGDTLVVKVTNKARYNVTIHWHGIRQMRTGWADGPEFVTQCPIRPGGSYTYRFTVQGQEGTL WWHAHSSWLRATVYGALIIHPKQGDSYPFPKPNRQETLLLGEWWDANPIDVVRQATRTGAAPNISDAYTINGQPGDLYNCSKKGTVVVPIDSGETNLLRV VNAALNQPLFFSVANHKLTVVGADASYTKPFTTKVLMLGPGQTTDVLISGDQQPSLYYMAAHAYFSAQNAPFDNTTTTAILEYKSVRCNNTTSCKKSKPI MPQLPAFNDTNTADVFTRSFRSPRKVEVPTEIDENLFFTIGLGLNKCPKHFRSRRCQGPNGTRFSASMNNVSFVLPNNMSILQAYQQNIPGVYTSDFPAN PPKKFDYTGNISRSLWQPSFGTKGYKLRYGSKVQVVLQDTSIVTPENHPVHLHGYDFYILAQGFGNFNAKTDTKKFNLVDPPLRNTVSVPANGWAVIRFV ADNPGAWLMHCHLDVHINWGLGMVFLVDNGVGQ |
Full Sequence |
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Protein Sequence Length: 575 Download |
MEAPSSILLL GLCLLFASSA MSTLAEPKAH HHEFVIQATP AKRLCKTHNS ITVNGQFPGP 60 TLEVNNGDTL VVKVTNKARY NVTIHWHGIR QMRTGWADGP EFVTQCPIRP GGSYTYRFTV 120 QGQEGTLWWH AHSSWLRATV YGALIIHPKQ GDSYPFPKPN RQETLLLGEW WDANPIDVVR 180 QATRTGAAPN ISDAYTINGQ PGDLYNCSKK GTVVVPIDSG ETNLLRVVNA ALNQPLFFSV 240 ANHKLTVVGA DASYTKPFTT KVLMLGPGQT TDVLISGDQQ PSLYYMAAHA YFSAQNAPFD 300 NTTTTAILEY KSVRCNNTTS CKKSKPIMPQ LPAFNDTNTA DVFTRSFRSP RKVEVPTEID 360 ENLFFTIGLG LNKCPKHFRS RRCQGPNGTR FSASMNNVSF VLPNNMSILQ AYQQNIPGVY 420 TSDFPANPPK KFDYTGNISR SLWQPSFGTK GYKLRYGSKV QVVLQDTSIV TPENHPVHLH 480 GYDFYILAQG FGNFNAKTDT KKFNLVDPPL RNTVSVPANG WAVIRFVADN PGAWLMHCHL 540 DVHINWGLGM VFLVDNGVGQ LQTIEPPPAD LPRC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 7.0e-56 | 35 | 151 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 4.0e-72 | 45 | 552 | 542 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 2.0e-82 | 24 | 552 | 562 | + oxidoreductase | ||
TIGR03388 | ascorbase | 6.0e-94 | 45 | 552 | 548 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 28 | 574 | 551 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 45 | 552 | 19 | 521 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
PDB | 1asq_A | 0 | 45 | 552 | 19 | 521 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
PDB | 1asp_B | 0 | 45 | 552 | 19 | 521 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
PDB | 1asp_A | 0 | 45 | 552 | 19 | 521 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |
PDB | 1aso_B | 0 | 45 | 552 | 19 | 521 | A Chain A, Barley Limit Dextrinase In Complex With Beta-Cyclodextrin |