Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna07690.1-v1.0-hybrid |
Family | GH3 |
Protein Properties | Length: 908 Molecular Weight: 103017 Isoelectric Point: 9.6429 |
Chromosome | Chromosome/Scaffold: Start: 8816479 End: 8831251 |
Description | Glycosyl hydrolase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 99 | 364 | 0 |
QSRLGIPIMYGIDAIHGHNNVYKATLFPHNVGLGVTRQVMTLWNGNLALHDERNISYIDDNLPIQFQICRDPDLMKRIGAATALEVKATGIHYAFSPCVA VCRDPRWGRCYESFSEDPTTVRKMTEIVAGLQGEVPDSQKGNPYIGGKDKVAGCAKHYVGDGGTIKGINENNTAIDWKDLLKIHMPGYFDSIDKGVCSIM VSYSSLNGVKMHANHDLVTNYLKNSLKFKGFVISDWQGLDKITYPFHSNYTYSVLASVSAGVDMFM |
Full Sequence |
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Protein Sequence Length: 908 Download |
MTEANLPGEH RKLKKKNYMA YKDPKQPIET RITDLMDRMT LEEKVAQMAQ LDRSSITEEL 60 MKKDNIGSVL NGGENLPRVG VTATQDIEMI NKFQNWSLQS RLGIPIMYGI DAIHGHNNVY 120 KATLFPHNVG LGVTRQVMTL WNGNLALHDE RNISYIDDNL PIQFQICRDP DLMKRIGAAT 180 ALEVKATGIH YAFSPCVAVC RDPRWGRCYE SFSEDPTTVR KMTEIVAGLQ GEVPDSQKGN 240 PYIGGKDKVA GCAKHYVGDG GTIKGINENN TAIDWKDLLK IHMPGYFDSI DKGVCSIMVS 300 YSSLNGVKMH ANHDLVTNYL KNSLKFKGFV ISDWQGLDKI TYPFHSNYTY SVLASVSAGV 360 DMFMLPFNYT EYHDIVLDLH SKQLIPDSRI DDAVSRILRV KFLMGLFENP MADYNYVDQL 420 GCQAHRDLAR EAVRKSLVLL KNGKQPNKPF LPLPKKANRI LVAGTHANNL GYQCGGWSIT 480 WQGVSGNNNT VGTTILGGII SAVYATTEVV HSLNPDPNFV KSSNFDYAIV AVGEPPYAES 540 RGDNSNLTIP EPGPSIITNI CNQVKCVVIL VSGRPLVIEP YLPMMEALVA AWLPGTEGQG 600 VADVLFGDHG FTGKLARTWF KRVDQLPMNI GDKNYDPLFP FGFGITTQPH MRRKSRSPTP 660 RRRKSRSPTP RRRKSRSPTL RRRKSRSPTP KRHRSRSPIS KRYKRQRSRS SSVSPIPKSP 720 TSSLGLLEQK NASEKLRQEE EEEKKRRQHE AELKLIEEET SKRVEEAIQQ KVEESLNSEE 780 IKVEIQTRME EGRKKLLNEV AAQLEKEKEA AIIEARQKEE QAQKEKEELE SMLEENRRRV 840 EEAQRKEALE QQRREEERYR ELEELQRQKE EAMRRKKQEE EEQRSNQMKL LGKNKSRPKL 900 SFALGSK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 1.0e-31 | 27 | 630 | 650 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-47 | 437 | 646 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 3.0e-71 | 24 | 646 | 695 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 3.0e-74 | 40 | 400 | 365 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 3.0e-77 | 39 | 495 | 472 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 17 | 647 | 1 | 599 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1iex_A | 0 | 17 | 647 | 1 | 599 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1iew_A | 0 | 17 | 647 | 1 | 599 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1iev_A | 0 | 17 | 647 | 1 | 599 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 1ieq_A | 0 | 17 | 647 | 1 | 599 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
Sequence Alignments (This image is cropped. Click for full image.) |
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