| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna07900.1-v1.0-hybrid |
| Family | GT90 |
| Protein Properties | Length: 1004 Molecular Weight: 114329 Isoelectric Point: 6.1434 |
| Chromosome | Chromosome/Scaffold: 3 Start: 22539476 End: 22546188 |
| Description | Arabidopsis thaliana protein of unknown function (DUF821) |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT90 | 681 | 923 | 0 |
| RVPDVDFMFDCMDKPTIERSEHASMPLPLFRYCTNDAHYDIPFPDWSFWGWPETNIEPWDEQFQAIKRGGQETTWRKKELLAYWKGNPDVGSPVRKELLN CNDSKTYRAQILKQDWDEEAKAGFQQSSLSKQCNHRYKIYAEGYAWSVSLKYILSCGSLALVITPQYEDFFSRGLFPKVNYWPISANAICPSIKSAVDWG HGHVPEAQAIGRRGQEYMENLNMDRVYDYMFHLITEYSKLQNF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1004 Download |
| MEDPETDRNH HESVPSSSSP STSQTQEQTE QQEQQRRSTS TFSYRVNVLI SDVAAFDMKD 60 DFWSGFIVLV TFWFFASMTM ILGFFGSADL QLGPNCSRLI RTNPFFVQTI KLLNVHLTDL 120 VFKQAQEIEG TKPGSILYGF YIPPPLDDEI AWTETHHTLE WIYFLNKGSR IDIYYHVKPS 180 SSSPLTLVIA QGRESLVEWI EDPSYGSGKI HQVISESSSY YIAVGNLNPE DVEADLEFNI 240 KSTLYNTSQA YYRCSIHNQY CGLELSLLGT TSAVLTSPGP KEGIQEDDWY VKVSYGPRWL 300 IYFLGSGVMT VLLLMAFRFC SIFQNAGEDR TDFQGREASP VRTPLLLPKD DDALSWGSSY 360 ECISNDEEDF EEFLGVSSLE GKSINGGDDN NTLRLCVICF DGPRDCFFLP CGHCATCFTC 420 GTRISEEAGT CPICRMKMKK GPKAVYLESN RKSEISGIQS RIMSYRIPTR VAHLCGPPNA 480 ATNSITFFFI FIIFIIVMGT LPRTTSRTPS YILRSVIALS CLSLLFIIYK VNDFASQTKT 540 VAGHNLDPTP WHPFRPKTFN HDALPSRAYK LLQCSYLACR YTNNKGNATT LEDEDHRRSA 600 TSVAKSPQCP EVFRWIHQDL EPWATTKITP VHIEQAKRYA AFRVVIYKGK LYVDLYYACV 660 QSRAMFTIWG LLQMLKRYPG RVPDVDFMFD CMDKPTIERS EHASMPLPLF RYCTNDAHYD 720 IPFPDWSFWG WPETNIEPWD EQFQAIKRGG QETTWRKKEL LAYWKGNPDV GSPVRKELLN 780 CNDSKTYRAQ ILKQDWDEEA KAGFQQSSLS KQCNHRYKIY AEGYAWSVSL KYILSCGSLA 840 LVITPQYEDF FSRGLFPKVN YWPISANAIC PSIKSAVDWG HGHVPEAQAI GRRGQEYMEN 900 LNMDRVYDYM FHLITEYSKL QNFKPVPPNT AMEVCANSVL CLADDAKQRE YLERTRAKPF 960 PGPPCDLQPP DGNLINKWKK EKAAVFQTVE DMNLVNDIPE PVP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13923 | zf-C3HC4_2 | 5.0e-9 | 395 | 436 | 43 | + Zinc finger, C3HC4 type (RING finger). | ||
| pfam13920 | zf-C3HC4_3 | 7.0e-14 | 394 | 440 | 47 | + Zinc finger, C3HC4 type (RING finger). | ||
| pfam05686 | Glyco_transf_90 | 1.0e-24 | 880 | 992 | 116 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
| pfam05686 | Glyco_transf_90 | 1.0e-75 | 605 | 772 | 171 | + Glycosyl transferase family 90. This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. | ||
| smart00672 | CAP10 | 7.0e-97 | 681 | 924 | 257 | + Putative lipopolysaccharide-modifying enzyme. | ||
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vjf_D | 0.00005 | 388 | 439 | 2 | 55 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 2vjf_B | 0.00005 | 388 | 439 | 2 | 55 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 2vje_D | 0.00005 | 388 | 439 | 2 | 55 | B Chain B, Crystal Structure Of The Mdm2-Mdmx Ring Domain Heterodimer |
| PDB | 2vje_B | 0.00005 | 388 | 439 | 2 | 55 | B Chain B, Crystal Structure Of The Mdm2-Mdmx Ring Domain Heterodimer |
| PDB | 3eb6_A | 0.0007 | 394 | 439 | 25 | 66 | B Chain B, Structure Of The Ciap2 Ring Domain Bound To Ubch5b |
