Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna07983.1-v1.0-hybrid |
Family | AA1 |
Protein Properties | Length: 562 Molecular Weight: 61866.4 Isoelectric Point: 9.1014 |
Chromosome | Chromosome/Scaffold: 3 Start: 22211482 End: 22214584 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 29 | 547 | 0 |
RHYKFNVVLKKTSRLCSSKPIVTINGKYPGPTIYAREDDTVLVKVVNHVKYNVSIHWHGIRQLRNGWADGPAYITQCPIQPGQQYVYNFTVTGQRGTLWW HAHILWLRATVYGALVVLPKLGVPYPFPAPKKEVVVILGEWWKSDVEAVINEALKSGAAPNVSDAHTINGHPGPLSLCSSQGGYKLPVQPGHTYLLRIIN AALNDELFFKVANHKLTVVEVDAVYTKPFETTTILIAPGQTTNVLLTADRSTGKYLVAASPFMDNPTVAVDNKTATATLHYRGSLASTNTILTVPPPQNA TRLATSFTKSLRSLNSDTYPAKVPLKIDHSLMFTVSLGLQTCPSCANGNRVVADLNNVTFVMPKISLLQAHVFNISGVFTDDFPGNPLMPYNYTGAQQPT NMQTMKGTRLYRLAYNSTVQLVLQDTGMIAPENHPVHLHGFNFFEVGRGLGNFNSKTDPKIFNLIDPVERNTVGVPSGGWTAIRFRADNPGVWFMHCHLE VHTTWGLKMAFVVDNGKGP |
Full Sequence |
---|
Protein Sequence Length: 562 Download |
MEMVLWFRAL LLVACISCLF PAPAECLERH YKFNVVLKKT SRLCSSKPIV TINGKYPGPT 60 IYAREDDTVL VKVVNHVKYN VSIHWHGIRQ LRNGWADGPA YITQCPIQPG QQYVYNFTVT 120 GQRGTLWWHA HILWLRATVY GALVVLPKLG VPYPFPAPKK EVVVILGEWW KSDVEAVINE 180 ALKSGAAPNV SDAHTINGHP GPLSLCSSQG GYKLPVQPGH TYLLRIINAA LNDELFFKVA 240 NHKLTVVEVD AVYTKPFETT TILIAPGQTT NVLLTADRST GKYLVAASPF MDNPTVAVDN 300 KTATATLHYR GSLASTNTIL TVPPPQNATR LATSFTKSLR SLNSDTYPAK VPLKIDHSLM 360 FTVSLGLQTC PSCANGNRVV ADLNNVTFVM PKISLLQAHV FNISGVFTDD FPGNPLMPYN 420 YTGAQQPTNM QTMKGTRLYR LAYNSTVQLV LQDTGMIAPE NHPVHLHGFN FFEVGRGLGN 480 FNSKTDPKIF NLIDPVERNT VGVPSGGWTA IRFRADNPGV WFMHCHLEVH TTWGLKMAFV 540 VDNGKGPNES VLPPPSDLPK C* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 2.0e-56 | 22 | 527 | 511 | + oxidoreductase | ||
PLN02191 | PLN02191 | 9.0e-72 | 1 | 551 | 584 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 5.0e-90 | 10 | 539 | 556 | + oxidoreductase | ||
TIGR03388 | ascorbase | 4.0e-103 | 29 | 539 | 545 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 26 | 561 | 540 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 29 | 540 | 4 | 522 | C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex |
PDB | 1asq_A | 0 | 29 | 540 | 4 | 522 | C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex |
PDB | 1asp_B | 0 | 29 | 540 | 4 | 522 | C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex |