| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna07985.1-v1.0-hybrid |
| Family | GH3 |
| Protein Properties | Length: 1880 Molecular Weight: 205037 Isoelectric Point: 4.7872 |
| Chromosome | Chromosome/Scaffold: 3 Start: 22228237 End: 22238000 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH3 | 1341 | 1576 | 0 |
| METRLRIPMVYGIDAVHGNNNVYGATIFPHNVGLGATRDADLAERIGVATALEVRASGIQYTFAPCVAVCRDPRWGRCYESYSEDTEIVRKMTSIISGLQ GKPPQGHENGYPFVMGRNSTIACAKHFVGDGGTHKGLNEGNTISSYDDLERIHMAPYLDCISQGVSTVMASFSSWNGSKLHADRFLLTEVLKNKLGFKGF VISDWAALDKICDPPGSNNRFCILSGINAGIDMVMV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1880 Download |
| MGVGAEDILV CVWRFLHFSM RTSSMCAQNY PFVAGALLFL FLLYAFFNLF VFFSPFLVCV 60 ALLLRIFWTS GGLIILQAKQ RSDQMQCKKT VRGAAVANRD ESSCLLKQKS RRTNVKKIEW 120 DAKSAKEGLG NSSLASPNDL VSKTVLLAKE ARALNMRQKE RPFSHGESSN AKMSSVDSIV 180 LDDGPSILDS DRDILSSSSS DDESEKFEGG GRKEEAAQQD GTKAVQWTDD DQRNLLDLGL 240 SEIERNKRLE SLIARRRARK LFKMQIEKGL IDLDTILPNQ IAPLYIARNN PYIAEMDGME 300 TPGSAPSVMF PAKNPFDLPY DPLEEKPDLK TDSFQQEFTA VTQRDMLYCR HESFCYGAAY 360 HLEPMSKALD GLGFSRFRRQ TSLGPHDRRI ERMLSNKGEH DELVETLLAV EAKSISHIDS 420 ISEVVDSEAT TPNQVTTSGE SKDEKCRQNE RENDIEGMRK MRNDQNVAVM ATRSETDIEQ 480 HVTDDSNDES TSSEEDEQRY PATKSGFSQH TASKGGRVPP KPLNCALPSP SNEKGRLEDR 540 LFYAERGPCH TPTYSIASDL QVEVSDIGSP PLTVDGANSP TDRESLNLDG DFEREYMWAA 600 SSSQSSRTEE NESKFRDMRG FNEKDLANIG SLGNSKNTKD VAESSIHLQQ PDELDDTYSL 660 SSTMTGIQAD SRTHSMSLED VRLVVEEVGQ LSASGLSNAP SPVNQVEKLI MESSSNPPDE 720 MTKVNVAAAN TIDDLKDEKQ IKDRDGEAKS STVGELSSKE GDSINLAIQK ENKNLNNTEG 780 DLQKVTKNEG NKDMLNPIDA IKTSNPNQDS KAQQSTSQID VSEKMQASKD PIASAVQKNL 840 ATQEENCKPP EKSTDESNII LKIQAQDVSQ KGMDTAAELK IPAEVVGSVS QKATMANAEL 900 KETDKRENVK QNETEPALEL KKPVEEIASV MQKAAEEIGS ISEKASKAPS EVKKPPEKIE 960 SDSKKATEAH ADLKKEVEQV ESVSQKATMV APDLKRPAEV GNVSGKTAET TAELKKSTEE 1020 VGSALPKSIE PSLELKKSVE ETVGVSQNAA VAPQDVKKST GVSTEAPSAE LKRSVEGIAS 1080 VSQKSAEESG NVAKKETEAN ADVRNKTTEG LSEVKNQADD TGSSMEKATK PALESKTSDK 1140 ETGGVSEIAR GDTAEVKKSA VDIGSVLNNA TGASAELKKP SEEIGIVSQK EPDTTAELKR 1200 QAENGSISQK EVETAAELKK TVEEIANVSH KASEVVADLK SPAEKSENVS GKAKEVAAML 1260 NSPAEETGNV SQKATEVAEE MKETTDEIGA LAQKANEAAT ELKKSAEELR SVLSAGGSGP 1320 FENAVSADWA DMVDGFQRSA METRLRIPMV YGIDAVHGNN NVYGATIFPH NVGLGATRDA 1380 DLAERIGVAT ALEVRASGIQ YTFAPCVAVC RDPRWGRCYE SYSEDTEIVR KMTSIISGLQ 1440 GKPPQGHENG YPFVMGRNST IACAKHFVGD GGTHKGLNEG NTISSYDDLE RIHMAPYLDC 1500 ISQGVSTVMA SFSSWNGSKL HADRFLLTEV LKNKLGFKGF VISDWAALDK ICDPPGSNNR 1560 FCILSGINAG IDMVMVPFKF QQFVEDLVYL VKHGEIPMSR IDDAVERILR VKFAAGLFEY 1620 PFADRSLLDI VGCKPHRDLA REAVRKSLVL LKNGKDPKKP FLPLDRKAKR ILVSGTHADD 1680 LGYQCGGWTA TWDGKSGRIT VGTTILEAIK KAVGEETEII YEPHPSTDTL ARQDISFAIV 1740 AVGEDPYAEF TGDRADLVIP FNGPDIISSV ADRIPTLAIL ISGRPLTLEP SLLKKMDAFI 1800 AAWLPGSEGE GITDVIFGDY DFEGKLPVTW FRSIKQLPLN FGSNSYDPLY PLGFGLTYNK 1860 DKATHKIDLM AEALSSNIE* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 1.0e-34 | 1362 | 1860 | 555 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 1.0e-51 | 1648 | 1858 | 231 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-74 | 1311 | 1611 | 305 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 1.0e-76 | 1307 | 1858 | 622 | + beta-D-glucoside glucohydrolase; Provisional | ||
| COG1472 | BglX | 8.0e-80 | 1315 | 1713 | 406 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1j8v_A | 0 | 1276 | 1862 | 15 | 603 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1iex_A | 0 | 1276 | 1862 | 15 | 603 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1iew_A | 0 | 1276 | 1862 | 15 | 603 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1iev_A | 0 | 1276 | 1862 | 15 | 603 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 1ieq_A | 0 | 1276 | 1862 | 15 | 603 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
