Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna08199.1-v1.0-hybrid |
Family | GT8 |
Protein Properties | Length: 1324 Molecular Weight: 147321 Isoelectric Point: 7.6434 |
Chromosome | Chromosome/Scaffold: 2 Start: 12312502 End: 12320848 |
Description | Transducin/WD40 repeat-like superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 300 | 592 | 0 |
CLSMQLTAEYFALESKERQFPNQHKLHDPQLYHYAVFSDNVLACAVVVNSTVSTALEPEKIVFHVVTDLLNFPALSMWFLLNPPGKATIQVQSIESFEWL STKHKRPLIQKSTNPRYTSELNHLRFYLPDIFPALNKVVLFDHDVVVQRDLSRLWSVNMKGKVNAAVETCRDSEPSFLEMDTFINFSDPYVANRFDVNAC TWAFGMNLFNLQNWRRHKLTTLYHKYMQLGSKRPLWVAGSLPLGWITFYNQTLALDRRWHALGLGYESGVVQGDVERAAVIHYDGIMKPWLDI |
Full Sequence |
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Protein Sequence Length: 1324 Download |
MKPFRRCQRI LILALLSLSV FAPILFVSQR LKNLNYTGRK EFVEDLSNIK YRTDSLKLSA 60 VEQEAGEGLK EPRKVLYEDK DVVSAVSYSL GENQDGKGSG NVGGTTDIAE RTENGTNDGS 120 KDIQFQQREM SSASGEKGKL NQALVQHEQS VVSQSRKVID QRIREIKSNH PVQKVNSNIQ 180 RVTDKINEMK DQMIRAKAYM TFAPPNSQLV KELRLRTKEV ERVVGRTHKD SDLSRSGLQK 240 MRNLEASLSK ASRAFPDCSA MTTKLRSMTH SAEEQVGLQR KQVTFLYHLA GSTTPKGLHC 300 LSMQLTAEYF ALESKERQFP NQHKLHDPQL YHYAVFSDNV LACAVVVNST VSTALEPEKI 360 VFHVVTDLLN FPALSMWFLL NPPGKATIQV QSIESFEWLS TKHKRPLIQK STNPRYTSEL 420 NHLRFYLPDI FPALNKVVLF DHDVVVQRDL SRLWSVNMKG KVNAAVETCR DSEPSFLEMD 480 TFINFSDPYV ANRFDVNACT WAFGMNLFNL QNWRRHKLTT LYHKYMQLGS KRPLWVAGSL 540 PLGWITFYNQ TLALDRRWHA LGLGYESGVV QGDVERAAVI HYDGIMKPWL DIAIGSVISR 600 PVPHDLDDGT AVIMASFTAS TPTSSVTRAA LVHKPSVGAP SSTILALPSI GNKGKLRCSM 660 EAKPPMKESN SNIGMSASLV AAALAATMSS PAAMALVDDR LSTEGTGLPF GLSNNLLGWI 720 LLGVFALIWT FYFTYTSGLE EDEESALLSA CGSLPFRAAK ADEPISLNIP SGFKSSRTKR 780 EVPDEPAFMQ ANDENGNGKE MSLEVMRVNK RKKPRNEVDE KDAVEQEKEM KKLESFLFGN 840 IYAPVEFGKE VEEGDAVDND SSLFFVDRSA NSVLSVGEDD GEVLEEEPKQ RKAVWEDDEE 900 AKANVNIAKV NRLRKLRKEE DESLISGSEY VSRLRAQHVK LNPGTEWAQL DSEPRNNKYS 960 DDESSDDEDR AVVAHGYKAV GAVDDLLRTN EDFVVKSSSK LLPGLLEYSI LTDANAEEPS 1020 SGPINSVQFH RNAQLLLTAG LDRRLRFFQI DGKRNAKIES IFIDDCPIRK AAFLPDGSQV 1080 IIAGRRKFFY SFDLVKAKVD RIGPLVGREE KSLEVFEVSP DSSTIAFVGN EGYILLVSTK 1140 TKELIGTLKM NGTARSLAFS EDGKQLLSSG GDGQIYHWDL RTGACFHKAV DEGCINGTSL 1200 CTSPNGKLFA AGSDSGIVNI YNREEFLGGK RKPIKTVENL TTKVDFLKFN TDSQILAICS 1260 SMKKNSLKLV HVPSLTVFSN WPPQKKTLHY PRCLDFSPGG GFMAMGNAAG KVLLYKLHHY 1320 HDA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02769 | PLN02769 | 6.0e-108 | 2 | 594 | 638 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 5.0e-119 | 165 | 595 | 474 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 1.0e-145 | 189 | 594 | 434 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 1 | 595 | 613 | + Probable galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 5 | 594 | 623 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
GO:0009507 | chloroplast |
GO:0009523 | photosystem II |
GO:0015979 | photosynthesis |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2ymu_B | 0.00000002 | 1021 | 1263 | 344 | 571 | A Chain A, Structure Of A Highly Repetitive Propeller Structure |
PDB | 2ymu_B | 0.0000002 | 1021 | 1263 | 98 | 325 | A Chain A, Structure Of A Highly Repetitive Propeller Structure |
PDB | 2ymu_B | 0.0000002 | 1021 | 1263 | 262 | 489 | A Chain A, Structure Of A Highly Repetitive Propeller Structure |
PDB | 2ymu_B | 0.00002 | 1066 | 1263 | 17 | 202 | A Chain A, Structure Of A Highly Repetitive Propeller Structure |