Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna08288.1-v1.0-hybrid |
Family | AA3 |
Protein Properties | Length: 732 Molecular Weight: 79532.1 Isoelectric Point: 7.7777 |
Chromosome | Chromosome/Scaffold: 2 Start: 13218423 End: 13221626 |
Description | Long-chain fatty alcohol dehydrogenase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA3 | 154 | 727 | 1.4013e-45 |
QNPSWKAIGYNVNKREKLIKTPKERPLEKGIIETMKKTDSTLIESLTKKGIEVTDGAAHPQIHKIKCDVVIVGSGCGGGVAAAVLAQSGQKVVVLEKGNY FVPKDYSLLEGPSMNELYESGGIMASKDGKMMILAGSTVGGGSAVNWSASIRTPNSVLEEWFVDHKIPLFGSPDYQSAMDAVCKRIGVTDSCTEENMQNQ ILRKGCEKLGLKVDSVPRNSSADHYCGSCNYGCPTGDKQGTDSTWLVDAVKCGAVILTGCKAERFIMENDHQGGTSRKRCLGVQAISLCKNITKKIQIEA KVTISACGSLLTPPLMITSGLKNPNIGRNLHLHPVLLAWGNFPEDSSEFKGKAFEGGIITSLHKVVSEDNQNVRAIVETAALGPASFATLVPWVSGLDMK DRVAKYARTAHLFALVRDKGSGEVRAENKIEYRLDRSDKENIQAGLRQAVRILIAAGAVEVGTYRNDGQRIVCKGTKKEDLEEFLDSVIAVGGPRTRGEY WTMYSTAHQMGSCKMGATEKEGGVDENGESWEAEGLFVCDGSLLPTAIGVNPMITIQSTAYCVSKKIADSLKKE |
Full Sequence |
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Protein Sequence Length: 732 Download |
MEGRENSHHP LLSGVRSGKF SHGFSAAQIQ SLAAMCEALI PPLSLDDTSD QALHSFYKAS 60 GSEPPIPDEV LSYRLGNLLV CGYPCLDKNW PFIHNFAEMS LEKREEALQR WSREKRLIPL 120 RLLFVVVKIF CFFCFFSRVS KLDGVDDKIV GDSQNPSWKA IGYNVNKREK LIKTPKERPL 180 EKGIIETMKK TDSTLIESLT KKGIEVTDGA AHPQIHKIKC DVVIVGSGCG GGVAAAVLAQ 240 SGQKVVVLEK GNYFVPKDYS LLEGPSMNEL YESGGIMASK DGKMMILAGS TVGGGSAVNW 300 SASIRTPNSV LEEWFVDHKI PLFGSPDYQS AMDAVCKRIG VTDSCTEENM QNQILRKGCE 360 KLGLKVDSVP RNSSADHYCG SCNYGCPTGD KQGTDSTWLV DAVKCGAVIL TGCKAERFIM 420 ENDHQGGTSR KRCLGVQAIS LCKNITKKIQ IEAKVTISAC GSLLTPPLMI TSGLKNPNIG 480 RNLHLHPVLL AWGNFPEDSS EFKGKAFEGG IITSLHKVVS EDNQNVRAIV ETAALGPASF 540 ATLVPWVSGL DMKDRVAKYA RTAHLFALVR DKGSGEVRAE NKIEYRLDRS DKENIQAGLR 600 QAVRILIAAG AVEVGTYRND GQRIVCKGTK KEDLEEFLDS VIAVGGPRTR GEYWTMYSTA 660 HQMGSCKMGA TEKEGGVDEN GESWEAEGLF VCDGSLLPTA IGVNPMITIQ STAYCVSKKI 720 ADSLKKEKAS G* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03970 | Rv0697 | 0.006 | 574 | 709 | 139 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
pfam05199 | GMC_oxred_C | 9.0e-20 | 583 | 714 | 132 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
COG2303 | BetA | 1.0e-26 | 240 | 729 | 558 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
pfam00732 | GMC_oxred_N | 3.0e-90 | 267 | 488 | 225 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
Gene Ontology | |
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GO Term | Description |
GO:0009055 | electron carrier activity |
GO:0016491 | oxidoreductase activity |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3nne_H | 0.000003 | 408 | 729 | 225 | 531 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
PDB | 3nne_G | 0.000003 | 408 | 729 | 225 | 531 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
PDB | 3nne_F | 0.000003 | 408 | 729 | 225 | 531 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
PDB | 3nne_E | 0.000003 | 408 | 729 | 225 | 531 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |
PDB | 3nne_D | 0.000003 | 408 | 729 | 225 | 531 | A Chain A, Crystal Structure Of Choline Oxidase S101a Mutant |