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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna08349.1-v1.0-hybrid |
Family | GT47 |
Protein Properties | Length: 624 Molecular Weight: 71069.8 Isoelectric Point: 6.1137 |
Chromosome | Chromosome/Scaffold: 2 Start: 13592410 End: 13594281 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 168 | 508 | 0 |
GGRYIYVHDLPPRFNEDMLKECRSLSLWTNMCKFTTNAGLGPPLENVEGVFEDTSWYATNQFAVDVIFTNRMKQYECLTNDSSLAAAVFVPFYAGFDIAR YLWGFNISRRDAASLDLVDWLMKRPEWSVMGGKDHFLVAGRITWDFRRLTENEEDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDADV LIWQDRMRKLERKWLFSFAGAPRPGNAKSIRGQIIDQCKSSKVGKLLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHP GSAYAQYTWHLPRDYTTYSVFIPENDIRKENISIEERLSQI |
Full Sequence |
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Protein Sequence Length: 624 Download |
MRRRSPTNFP SEQMEKGTGK NQNTRICFLA SLSIFFWMLL LYFHFIVLGS SSAVDQSGKL 60 EVGPMSSDSQ PILVTDPPPQ MEKPKPKPSD PVTSDPQVEK PKVDNEPKRV PVTSDAEVGK 120 VDSEPKPTIV PVTRKIGPLV ETTPSQEAEK YPFMRALRTV ENKSDPCGGR YIYVHDLPPR 180 FNEDMLKECR SLSLWTNMCK FTTNAGLGPP LENVEGVFED TSWYATNQFA VDVIFTNRMK 240 QYECLTNDSS LAAAVFVPFY AGFDIARYLW GFNISRRDAA SLDLVDWLMK RPEWSVMGGK 300 DHFLVAGRIT WDFRRLTENE EDWGNKLLFL PAAKNMSMLV VESSPWNAND FGIPYPTYFH 360 PAKDADVLIW QDRMRKLERK WLFSFAGAPR PGNAKSIRGQ IIDQCKSSKV GKLLECDFGE 420 SKCHSPSSIM QMFQSSLFCL QPQGDSYTRR SAFDSMLAGC IPVFFHPGSA YAQYTWHLPR 480 DYTTYSVFIP ENDIRKENIS IEERLSQIPP EKVKAMREEV INLIPRLVYA DPRSKLEIFK 540 DAFDVSVQAI INKVTKARRD IVEGRTDDNF IEEISWKYAL LEEGQREVGP HEWDPFFAKQ 600 KDGNGDSGEA AKNSWENEQR QHS* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-73 | 166 | 508 | 358 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |