Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna09290.1-v1.0-hybrid |
Family | GT4 |
Protein Properties | Length: 1957 Molecular Weight: 218159 Isoelectric Point: 8.9399 |
Chromosome | Chromosome/Scaffold: 5 Start: 9513235 End: 9523248 |
Description | Stabilizer of iron transporter SufD / Polynucleotidyl transferase |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 1615 | 1784 | 0 |
ADKKKPIIFSMARLDKVKNLSGLVEWFGRNKRLRNLVNLVIVGGFFDPSKSKDREEIAEIIKLHALVKEYQLNGQFRWIAAQTDRYRNGELYRCIADTKG AFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPNNGEESSNKIADFFERCKADGE |
Full Sequence |
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Protein Sequence Length: 1957 Download |
MVRKRRTELP GGSESSETGS QRPAAPPPQQ QQQQQQGGGG RGSVPQQQGG GYQGGRGSTS 60 QGGRGGYGGG RGGYGTPQQQ YGRGGPPQQP GGRGGYSGGH GGPSAGGPSR PPVSELHQAS 120 PVPYQAGLTP QPAFQASSSS QPPEPSEVAE QLQQVSIRQE EASSQAIQQV PVSSKGVRFP 180 LRPGKGKTGT RCTVKANHFF AELPDKDLHQ YDVTITPEVT SRGVNRAVMS QLVKTYKDSH 240 LSSRLPAYDG RKSLYTAGPL PFQSKEFKIT LLDDEEGQAG QARREREFRV VIKFAARADL 300 HHLGLFLQGR IADAPQEALQ VLDIVLRELP TSRYCPVGRS FYDPGLGRRQ PLGEGLESWR 360 GFYQSIRPTQ MGLSLNIDMS STAFIEPLPV IEFVTQLLNR DVQARPLSDS DRVKIKKALR 420 GVKVEVTHRG NMRRKYRISG LTSQATRELT FPVDERGTMK SVVDYFHETY GFAIQHPYWP 480 CLQVGNSQRP NYLPMEVCKI VEGQRYSKRL NERQITALLK VTCQRPQERE RDIMQTVRHN 540 AYAEDPYAKE FGIKISENLA QVEARILPPP WLKYHDTGRE KDCLPQVGQW NMMNKKMVNG 600 GKVSNWICIN FSRNVQDSVA KGFCYELAQM CHISGMAFTP EPVLPPITAR PDQVEKVLKT 660 RYHDAMTKIP GKELDLLVVI LPDNNGSLYG DLKRICETDL GLVSQCCLTK HVFRMSKQYL 720 ANVALKINVK VGGRNTVLVD AISRRIPLVS DRPTIIFGAD VTHPHPGEDS SPSIAAVVAS 780 QDWPEITKYA GLVCAQAHRQ ELIQDLFKQW QDPVKGTMSG GMIKDGVSEG QFYQVLLYEL 840 DAIRKACASL EPNYQPPVTF VVVQKRHHTR LFPDNHRDRN SVDRSGNILP GTVVDSKICH 900 PTEFDFYLCS HAGIQAIIIS FSYFYVFGTS RPAHYHVLWD ENKFTADALQ SLTNNLCYTY 960 ARCTRSVSIV PPAYYAHLAA FRARFYMEPE TSDSGSMSSG AHVRGSGMSG AGGGRSTRAP 1020 GPNAAVRPLP ALKENVKKSP SFTSAKMASV PALKRADSIA ETMPDALRQS RYYMKKVFAR 1080 FVGDGKRLLK PQHIMEEVEN SIEDGNEKSK VLRGLLGYIL NSTQEAAVVP PYVAFSVRPN 1140 PGFSEFVKVN ADDLAVDGIS VTEYLKFKEM IYDENWANDE NALEVDFGSI DFSRPRMTLP 1200 SSIGNGLNFI LKLISSRLNA TSSDYAKPLL GYLLELNHHG QNLMINETMD SVEKLETSLI 1260 RAQSFVSALP KETPFLNFEQ RLKDMGFEKG WGDTAERVNE RMWTLSEVLQ APDSVKLESF 1320 FSSLPNTFNI VIFSPHGYFG QSDVLGLPDT GGQVVYILDQ VRALEEEMLL RIKQQGLAVK 1380 PQILVVTRLI PDSRGTKCNV ELEAIVNTKH SHILRVPFRT DKGILRHWVS RFDIYPYLET 1440 FDATAKILQH MDCKPDLVIG NYSDGNLVAS LMATKLGITQ GTIAHALEKT KYEDSDAKWK 1500 DFDTKYHFSC QFTADLISMN STDFIITSTF QEISGGKDRP GQYESHTAFT MPGLCRVVSG 1560 IDVFDPKFNI AAPGADQSVY FPHSDKRQRF TKFHPSIEQM VYNKEENDEH IGFLADKKKP 1620 IIFSMARLDK VKNLSGLVEW FGRNKRLRNL VNLVIVGGFF DPSKSKDREE IAEIIKLHAL 1680 VKEYQLNGQF RWIAAQTDRY RNGELYRCIA DTKGAFVQPA LYEAFGLTVI EAMNCGLPTF 1740 ATNQGGPAEI IVDGVSGFHI DPNNGEESSN KIADFFERCK ADGEYWKKMS AAGLQRIYEC 1800 YTWKIYANKV LNMASTYGFW RQLRKEQKLA KQSYIHMFYS LLFRTLARSV PVPSDGFEPV 1860 PMPKAIAAAD HGQPKSGTTV SKPPQAAAAP PLPPVALITP TPRDGGGLEQ ITKQPISPPD 1920 VPSPNRPTRC IWNCFFVIFA FLCLVYYKIK NMYYSL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00142 | PLN00142 | 0 | 1047 | 1861 | 817 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 1071 | 1851 | 784 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 1055 | 1603 | 551 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. | ||
PLN03202 | PLN03202 | 0 | 169 | 1042 | 949 | + protein argonaute; Provisional | ||
cd04657 | Piwi_ago-like | 0 | 546 | 987 | 462 | + Piwi_ago-like: PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of which provides the 5' anchoring of the guide RNA and the other, the catalytic site for slicing. |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 1053 | 1858 | 8 | 810 | A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser |
PDB | 3s29_G | 0 | 1053 | 1858 | 8 | 810 | A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser |
PDB | 3s29_F | 0 | 1053 | 1858 | 8 | 810 | A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser |
PDB | 3s29_E | 0 | 1053 | 1858 | 8 | 810 | A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser |
PDB | 3s29_D | 0 | 1053 | 1858 | 8 | 810 | A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser |