Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna10276.1-v1.0-hybrid |
Family | GT14 |
Protein Properties | Length: 435 Molecular Weight: 49548.6 Isoelectric Point: 8.3482 |
Chromosome | Chromosome/Scaffold: 6 Start: 31820772 End: 31823159 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 90 | 346 | 0 |
LAYLISGTKGDSHRMMRTLSAVYHPRNQYVLHLDLEAPPRERLELASLVKADPTFSEVENVRVMAQSNLVTYKGPTMIACTLQAISILLKESSEWDWFIN LSASDYPLMTQDDLLHSFSNLSRDINFIENMQITGWKLNQRAKPIIIDPGLYLSKKSDLAWTTQRRSLPTSFKLFTGSAWVMVTRPFVEYCIWGWDNLPR TILMYYTNFVSSPEGYFHTVICNNEEYRHTAISHDLHYIAWDSPPKQHPKSLSMKDF |
Full Sequence |
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Protein Sequence Length: 435 Download |
MSMRKYVNHH SGRVVGDRVW VLPFIASFVI FITLFFSVIS GLFTLPHSKE QLTDIVSFNS 60 DDSAGGYFVE SDLKRSLEQN KYSRTGAPRL AYLISGTKGD SHRMMRTLSA VYHPRNQYVL 120 HLDLEAPPRE RLELASLVKA DPTFSEVENV RVMAQSNLVT YKGPTMIACT LQAISILLKE 180 SSEWDWFINL SASDYPLMTQ DDLLHSFSNL SRDINFIENM QITGWKLNQR AKPIIIDPGL 240 YLSKKSDLAW TTQRRSLPTS FKLFTGSAWV MVTRPFVEYC IWGWDNLPRT ILMYYTNFVS 300 SPEGYFHTVI CNNEEYRHTA ISHDLHYIAW DSPPKQHPKS LSMKDFDNMV KSNAPFARKF 360 PKNDPVLDKI DKELLGRTSR FAPGAWCIGS SEGGADPCSV RDNDSVFRPG PGAERFQVLL 420 HTLLSDEFRK KQCS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 1.0e-79 | 90 | 350 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 0 | 12 | 433 | 425 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.000000005 | 106 | 310 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.000000005 | 106 | 310 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.000000005 | 106 | 310 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.000000005 | 106 | 310 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000002 | 106 | 310 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |