Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna10629.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 561 Molecular Weight: 60844.4 Isoelectric Point: 8.9978 |
Chromosome | Chromosome/Scaffold: 2 Start: 16077483 End: 16079272 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 246 | 542 | 0 |
VTVRQDGSGDYTTITDAIAATPNNSAAANGYFMIYVTAGVYEEYVSIAKNKRYLMMVGDGINQTILTGNRSVVDGWTTFNSATLAVVAPGFVAVNMTFRN TAGAAKHQAVAVRNGADLSTFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPMTGQFNAITAQGRTDPNQNTGTSIHNCT IRAADDLASSNGTTQTYLGRPWKEYSRTVYMQSNIDSVVNSAGWRAWDGEFALSTLYYAEYNNTGAGSDTTNRVTWAGYHVITNSSDASNFTVSNFL |
Full Sequence |
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Protein Sequence Length: 561 Download |
MASSKVLATA SFLIFLSLFA SLSLAANTTD PTTPVSSGTI CKSTPDPSYC KSVLSNQTSS 60 TVYDFGRFSV RKSLSQARKF LNLVDNYLKK GSSLSVPAVR ALEDCRFLAG LNMDLLSNSF 120 QTVDKTSRLL STLKADDVQT FLSAILTNQQ TCLDGIQAVA SSWGLKNGLA VPLRNDTKLY 180 SVSLALFTKG WVPKNKKGSG GRTGRKSGFK NGRLPMKMSS KSRKVYEAAS RRKLEEDDGV 240 LVSEVVTVRQ DGSGDYTTIT DAIAATPNNS AAANGYFMIY VTAGVYEEYV SIAKNKRYLM 300 MVGDGINQTI LTGNRSVVDG WTTFNSATLA VVAPGFVAVN MTFRNTAGAA KHQAVAVRNG 360 ADLSTFYSCS FEAYQDTLYT HSLRQFYREC DIYGTVDFIF GNAAVVLQNC NIYPRLPMTG 420 QFNAITAQGR TDPNQNTGTS IHNCTIRAAD DLASSNGTTQ TYLGRPWKEY SRTVYMQSNI 480 DSVVNSAGWR AWDGEFALST LYYAEYNNTG AGSDTTNRVT WAGYHVITNS SDASNFTVSN 540 FLLGEDWLPQ TGVPYTGGLL * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 1.0e-145 | 31 | 559 | 540 | + pectinesterase | ||
PLN02301 | PLN02301 | 1.0e-153 | 27 | 559 | 540 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-177 | 246 | 545 | 300 | + Pectinesterase. | ||
PLN02713 | PLN02713 | 0 | 31 | 560 | 538 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 41 | 560 | 542 | + Probable pectinesterase/pectinesterase inhibitor; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 246 | 559 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 248 | 559 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 1e-20 | 256 | 513 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 1e-20 | 256 | 513 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-20 | 256 | 513 | 18 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |