y
Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna10649.1-v1.0-hybrid |
Family | GH14 |
Protein Properties | Length: 554 Molecular Weight: 61892.9 Isoelectric Point: 7.7675 |
Chromosome | Chromosome/Scaffold: 5 Start: 12319015 End: 12321177 |
Description | chloroplast beta-amylase |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH14 | 94 | 508 | 0 |
YVMLPLDTVTHGGHLNKPRAMNVSLMALKNAGVEGVMVDAWWGLVEKDGPSKYNWEGYAELVNLVQRHGLKIQVVMSFHQCGGNVGDSCSIPLPPWVLEE ISKNPDLVYTDKSGRRNPEYISLGCDSLPVLRGRTPIQAYTDYMKSFHDRFRDYMGDVIVEIQVGMGPCGELRYPAYPESNGTWKFPGIGEFQCYDKYMK ASLEASAEAQGKRDWGTTGPHDSGQYNQFPEDTGFFKRDGTWNTEYGRFFLEWYSEKLLRHGDRLLAAAKGVFQGTGAKLSGKVAGIHWHYRTRSHAAEL TAGYYNTRLRDGYIPTAKMFSKHGVVLNFTCMEMKDGEQPDNANCSPEGLVRQVKMATKSAGIDLAGENALERYDSGAYGQVLATSRSDSGNALSAFTYL RLNKRLFEGDNWRNM |
Full Sequence |
---|
Protein Sequence Length: 554 Download |
MTLTLRSSTS FINLKDYSKG LKTSDESSSG VVCFAQMKPS FRIRAKSSLQ EAQLFQERIR 60 VSSTTDDLPR ELLHALPSIA HSSNNNDSKK VPVYVMLPLD TVTHGGHLNK PRAMNVSLMA 120 LKNAGVEGVM VDAWWGLVEK DGPSKYNWEG YAELVNLVQR HGLKIQVVMS FHQCGGNVGD 180 SCSIPLPPWV LEEISKNPDL VYTDKSGRRN PEYISLGCDS LPVLRGRTPI QAYTDYMKSF 240 HDRFRDYMGD VIVEIQVGMG PCGELRYPAY PESNGTWKFP GIGEFQCYDK YMKASLEASA 300 EAQGKRDWGT TGPHDSGQYN QFPEDTGFFK RDGTWNTEYG RFFLEWYSEK LLRHGDRLLA 360 AAKGVFQGTG AKLSGKVAGI HWHYRTRSHA AELTAGYYNT RLRDGYIPTA KMFSKHGVVL 420 NFTCMEMKDG EQPDNANCSP EGLVRQVKMA TKSAGIDLAG ENALERYDSG AYGQVLATSR 480 SDSGNALSAF TYLRLNKRLF EGDNWRNMVE FVKGMADGGR NQRLSECDST GTDLYVRFIK 540 EKNVQEEKDT VLV* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02161 | PLN02161 | 6.0e-148 | 89 | 516 | 439 | + beta-amylase | ||
pfam01373 | Glyco_hydro_14 | 1.0e-176 | 94 | 511 | 431 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
PLN02803 | PLN02803 | 0 | 1 | 553 | 554 | + beta-amylase | ||
PLN00197 | PLN00197 | 0 | 84 | 526 | 449 | + beta-amylase; Provisional | ||
PLN02801 | PLN02801 | 0 | 91 | 515 | 433 | + beta-amylase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdp_A | 0 | 80 | 515 | 1 | 441 | A Chain A, Golgi Alpha-Mannosidase Ii In Complex With Deoxymannojirimicin |
PDB | 1q6c_A | 0 | 80 | 515 | 1 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1bfn_A | 0 | 80 | 515 | 1 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
PDB | 1uko_D | 0 | 80 | 515 | 1 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_C | 0 | 80 | 515 | 1 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
Sequence Alignments (This image is cropped. Click for full image.) |
---|