Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna10709.1-v1.0-hybrid |
Family | AA2 |
Protein Properties | Length: 324 Molecular Weight: 34940.8 Isoelectric Point: 9.098 |
Chromosome | Chromosome/Scaffold: 5 Start: 11523957 End: 11525227 |
Description | Peroxidase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 49 | 307 | 2.10055e-42 |
QTVQKHFKSTPSIAPGLLRMHFHDCFVQGCDGSVLLSGPNTEKTAGPNLGLRGWEVIDDAKTQLEAACPGVVSCADILALAARDSVVLTKGINWKVPTGR FVGRVSLASETNNLPGFRESIDAQKSKFQALGLNTQDLVTLVVLQVQALIYNFTTTGNGADPTIDASFLTQLRALCPQGGDATKRVDLDTGSGTQFDAAF FRNLQNGRGILESDQKLWTDASTKSFDQRYSGVRFRGLQALNFNVEFGRSMVKMSNIGV |
Full Sequence |
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Protein Sequence Length: 324 Download |
MYQKSSSISV MFLALLVLAT TFPGSVQSQT TRVGFYSRSC PRAESIVTQT VQKHFKSTPS 60 IAPGLLRMHF HDCFVQGCDG SVLLSGPNTE KTAGPNLGLR GWEVIDDAKT QLEAACPGVV 120 SCADILALAA RDSVVLTKGI NWKVPTGRFV GRVSLASETN NLPGFRESID AQKSKFQALG 180 LNTQDLVTLV VLQVQALIYN FTTTGNGADP TIDASFLTQL RALCPQGGDA TKRVDLDTGS 240 GTQFDAAFFR NLQNGRGILE SDQKLWTDAS TKSFDQRYSG VRFRGLQALN FNVEFGRSMV 300 KMSNIGVKSA KNGEIHRICS AIN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 0.002 | 250 | 278 | 29 | + Peroxidase. | ||
cd00314 | plant_peroxidase_like | 3.0e-14 | 45 | 304 | 292 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
pfam00141 | peroxidase | 6.0e-58 | 47 | 183 | 138 | + Peroxidase. | ||
cd00693 | secretory_peroxidase | 1.0e-139 | 32 | 322 | 303 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
PLN03030 | PLN03030 | 8.0e-171 | 8 | 323 | 325 | + cationic peroxidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 35 | 323 | 7 | 304 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1pa2_A | 0 | 35 | 323 | 7 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1qgj_B | 0 | 35 | 323 | 6 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1qgj_A | 0 | 35 | 323 | 6 | 299 | A Chain A, Arabidopsis Thaliana Peroxidase N |
PDB | 1sch_B | 0 | 35 | 323 | 6 | 294 | A Chain A, Peanut Peroxidase |