| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna10854.1-v1.0-hybrid |
| Family | CE8 |
| Protein Properties | Length: 270 Molecular Weight: 28886.4 Isoelectric Point: 4.9437 |
| Chromosome | Chromosome/Scaffold: 5 Start: 13090202 End: 13091894 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 48 | 268 | 0 |
| DMVVAKNGPANFTTIGDAIKAAPNNSLKRINIKVMAGVYDEYIVVEAEKTNLTIIGEGIDKTIITGNRSNATGFGTYYSATIGIQGYGFIAQDLTLENTA GPEGGQAVSLLSESYNSVYFRCKISDYQDTLYAKEGVQFFKGCEIYGTVDFIFGNSQVFFQGCNVYARKPVKGQSITITAQGRESSSDSTGTVFQNCTFR ATSELITSGFPVDGYLGRPWR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 270 Download |
| MSPDGGGNSA AEDGGRDRLR RAGVLTLVSL SRSPLKELAV GQEEIGFDMV VAKNGPANFT 60 TIGDAIKAAP NNSLKRINIK VMAGVYDEYI VVEAEKTNLT IIGEGIDKTI ITGNRSNATG 120 FGTYYSATIG IQGYGFIAQD LTLENTAGPE GGQAVSLLSE SYNSVYFRCK ISDYQDTLYA 180 KEGVQFFKGC EIYGTVDFIF GNSQVFFQGC NVYARKPVKG QSITITAQGR ESSSDSTGTV 240 FQNCTFRATS ELITSGFPVD GYLGRPWRA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 3.0e-73 | 45 | 268 | 224 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02933 | PLN02933 | 1.0e-73 | 30 | 268 | 239 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02416 | PLN02416 | 4.0e-76 | 49 | 268 | 220 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 2.0e-80 | 29 | 268 | 243 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-100 | 48 | 268 | 221 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 45 | 268 | 5 | 228 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 48 | 268 | 4 | 224 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 6e-21 | 59 | 268 | 44 | 270 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 5e-19 | 47 | 268 | 4 | 246 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 5e-19 | 47 | 268 | 4 | 246 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
|---|
 |