Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna11074.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 546 Molecular Weight: 61102.4 Isoelectric Point: 8.645 |
Chromosome | Chromosome/Scaffold: 2 Start: 16087744 End: 16089485 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 231 | 528 | 0 |
VTVSQDGNGNFTTVNEAVAAAPINTEGKNGYFLIYIKAGVYEEYVNIAKNKKYLMMIGDGINRTIITGNRSVVDGWTTFNSATFVVMAPLFVAVNMTFRN TAGASKHQAVAVRNDGDLSAFYHCSFEGYQDTLYTHSQRQFYKQCDVYGTVDFIFGNAAAILQNCNIYPRLPMRGQFNAITAQGRSDPNQNTGIMIHNCN IRASDDLASDKGKTRTYLGRPWREYSRTVYMKCFMDGCIDREGWSKWTGDFALSTLYYAEYKCKGPGSKTRGRVTWRGYHILRKPKEAKNFTVSKFLR |
Full Sequence |
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Protein Sequence Length: 546 Download |
MDSQPFFVFK LSIVSLHLIP ILFASGCLAS EAGCATDTVP KEIICKNTRN PSYCNSILPN 60 QTTNLYDHGR FAVRKSLSQS HKLHHLVNKY LKANSNLSKT AILALEDCKL LAELNVDFLA 120 KSLKNLNDTN QTLPSSKAED VHTWLSAVLT NQQTCLDSVQ ATSSSSSWRS MQNGLLLSDN 180 TNLYSVSLAL FTKGWVPETE EEEVVEKEEE VITWREQLLR NFGDVLVSET VTVSQDGNGN 240 FTTVNEAVAA APINTEGKNG YFLIYIKAGV YEEYVNIAKN KKYLMMIGDG INRTIITGNR 300 SVVDGWTTFN SATFVVMAPL FVAVNMTFRN TAGASKHQAV AVRNDGDLSA FYHCSFEGYQ 360 DTLYTHSQRQ FYKQCDVYGT VDFIFGNAAA ILQNCNIYPR LPMRGQFNAI TAQGRSDPNQ 420 NTGIMIHNCN IRASDDLASD KGKTRTYLGR PWREYSRTVY MKCFMDGCID REGWSKWTGD 480 FALSTLYYAE YKCKGPGSKT RGRVTWRGYH ILRKPKEAKN FTVSKFLRGR KWLPQTGVPF 540 TSGLI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 9.0e-149 | 70 | 544 | 485 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 5.0e-151 | 104 | 544 | 442 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 12 | 545 | 564 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 40 | 545 | 544 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
pfam01095 | Pectinesterase | 0 | 231 | 529 | 299 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 227 | 544 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 233 | 544 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 7e-25 | 234 | 534 | 12 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 7e-25 | 234 | 534 | 12 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 7e-25 | 234 | 534 | 12 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |