Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna11077.1-v1.0-hybrid |
Family | GT4 |
Protein Properties | Length: 848 Molecular Weight: 96542.8 Isoelectric Point: 5.9221 |
Chromosome | Chromosome/Scaffold: 2 Start: 16107092 End: 16112349 |
Description | sucrose synthase 3 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 603 | 769 | 0 |
LNDPSKPILFSMARLDHVKNLTGLVESYAKNAKLRELVNLVLVAGYNDVKKSNDREEIVEIEKLHALIKEYNLNGQFRWLSSQTNRARNGELYRYVADNG GAFVQPALYEAFGLTVVEAMTCGLPTFATIHGGPAEIIEHGISGFHIDPYHSEQMAALMADFFQRSK |
Full Sequence |
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Protein Sequence Length: 848 Download |
MFRLIPLKGS QGSDSTVENK EDEEEEEQAC NCNSTMANRP KLTRIPSMRD RVEDTLSAHR 60 NEIVALLSRY VAQGKGILQP HDLLDELEKL ITDDEARLAL SEGPFGEVLK SAQEAIIHPP 120 FVALAVRPRP GVWEFVRVNV NELSVEQLSV SEYLSFKEEL VDGRSNDRYV LELDFEPFNA 180 NFPRPTRSSS IGNGVQFLNR HLSSIMFRNK ESLEPLVDFL RAHTYKGHAL MLNDRIQSIP 240 KLQSALVKAE DKLSKLPTET PYSEFEYVLQ GLGFERGWGD TAEHVLEMMH LLLDTLQAPD 300 PSTLETFLGR VPMVFNVVIL SPHGYFGQAN VLGLPDTGGQ VVYILDQVRA LENEMIRRIK 360 RQGLNFTPRI LIVTRLIPDA KGTTCNQRLE RVTGTEHSHI LRVPFRSENG ILRKWISRFD 420 VWPYLETFAE DVAGEITAEL QGHPDFIIGN YSDGNLVASL LAYKMGVTQC TIAHALEKTK 480 YPDSDIYWKK YDEKYHFSCQ FTADLIAMNN ADFIITSTYQ EIAGTKNTVG QYESHSSFTL 540 PGLYRVVHGI NVFDPKFNIV SPGADMSIYF PYFDKEKRLT SLHGSIEKLL FDPEQNDEHI 600 GLLNDPSKPI LFSMARLDHV KNLTGLVESY AKNAKLRELV NLVLVAGYND VKKSNDREEI 660 VEIEKLHALI KEYNLNGQFR WLSSQTNRAR NGELYRYVAD NGGAFVQPAL YEAFGLTVVE 720 AMTCGLPTFA TIHGGPAEII EHGISGFHID PYHSEQMAAL MADFFQRSKD DPSHWKRISD 780 GGLKRIYERY TWNIYSERLM TLTGVYGFWK YVSKLERLET RRYLEMFYIL QFRDLVKTVP 840 RAVDDPH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR02472 | sucr_P_syn_N | 3.0e-65 | 317 | 798 | 493 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. | ||
cd03800 | GT1_Sucrose_synthase | 9.0e-131 | 316 | 801 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
PLN00142 | PLN00142 | 0 | 36 | 847 | 812 | + sucrose synthase | ||
TIGR02470 | sucr_synth | 0 | 60 | 842 | 784 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00862 | Sucrose_synth | 0 | 43 | 591 | 549 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 36 | 845 | 1 | 808 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3s29_G | 0 | 36 | 845 | 1 | 808 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3s29_F | 0 | 36 | 845 | 1 | 808 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3s29_E | 0 | 36 | 845 | 1 | 808 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3s29_D | 0 | 36 | 845 | 1 | 808 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
Sequence Alignments (This image is cropped. Click for full image.) |
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