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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna11229.1-v1.0-hybrid |
Family | GH35 |
Protein Properties | Length: 916 Molecular Weight: 101678 Isoelectric Point: 7.9909 |
Chromosome | Chromosome/Scaffold: 2 Start: 16947894 End: 16954496 |
Description | beta-galactosidase 16 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 34 | 339 | 0 |
LIIDGQHKILFSGSIHYPRSTPQMWPSLIAKAKEGGIDVIQTYVFWNLHEPQKGQFVFNGRSDIVAFMKEVHRQGLYVCLRIGPFIESEWTYGGFPVWLR NIPGIVFRSDNEPYKAEMQRFTAKIVDLMKSNELYASQGGPIILSQIENEYKNVESAFHERGPPYVLWAASMAEGFQTGVPWVMCKQDDAPGAVINACNG MKCGETFAGPNAPNKPAIWTEDWTSQYQVYGDEPYLRRAEDIAYHVALFIAKNKGSYVNYYMYHGGTNFGRTASEFVTTSYYDEAPLDEYGMPNEPKYSH LKELHA |
Full Sequence |
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Protein Sequence Length: 916 Download |
MVWFILCGFA LLFMNPGTSL AGVNNNVMYD GRSLIIDGQH KILFSGSIHY PRSTPQMWPS 60 LIAKAKEGGI DVIQTYVFWN LHEPQKGQFV FNGRSDIVAF MKEVHRQGLY VCLRIGPFIE 120 SEWTYGGFPV WLRNIPGIVF RSDNEPYKAE MQRFTAKIVD LMKSNELYAS QGGPIILSQI 180 ENEYKNVESA FHERGPPYVL WAASMAEGFQ TGVPWVMCKQ DDAPGAVINA CNGMKCGETF 240 AGPNAPNKPA IWTEDWTSQY QVYGDEPYLR RAEDIAYHVA LFIAKNKGSY VNYYMYHGGT 300 NFGRTASEFV TTSYYDEAPL DEYGMPNEPK YSHLKELHAA VKLSISPLLA GEQTVVNLGQ 360 SQTAYVYKVK SGECAAFLVN NGSKDAIVQF QNSPYQLYPK SISILPDCKS VAFNTGKVSA 420 QHATRSWTPT QKFDSHQNWQ EYNEPIPTYD NTSLRQNIIV DQMRTTNDLS DYLWYTFSFQ 480 HDSPNPESTL NVQTHGHVLH SFVNGVLVGS GHGVHRNAGF ALESKVNLNK GINHVSLLSA 540 MVGLPDNGAY LERRDYGLHS VKIDGKDFST YAWGYQVGLS GENLQIYTDT SKVQWHRLSS 600 TKHPMTWYKT LFDAPAGNDP VALNLGSMGK GEVWINGQSI GRYWVSFHTP KGTPSQTWYH 660 VPRSFLKPTG NLLVLIEEET GVDPVKISLD RISVAKVCAL VSETHLHPVS TWMYQRTSGN 720 LNNTRQNPGR KPTAKLRCPP NSYISKILYA SYGNPSGDCK TYAAGSCHSE DSTAVVQKAC 780 LGKRRCSVSV SSEKFGDPCP RISKTLLVDA QCDCQPCTEK NLVISQSPTG KLVQNKPEWS 840 LTITNNCICT QMSVKLSCDG FQSVEKIDSS VLSKSGSVCL VKGGQPIYGN SKFSFTYASA 900 TSFPFKPLSS QVACS* 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 6.0e-5 | 49 | 192 | 158 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 3.0e-22 | 27 | 303 | 324 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 2.0e-23 | 736 | 812 | 80 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 2.0e-146 | 33 | 341 | 323 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 11 | 812 | 844 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 2e-34 | 33 | 337 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.003 | 525 | 677 | 450 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 5e-33 | 27 | 337 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 5e-33 | 27 | 337 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |