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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna11394.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 316 Molecular Weight: 35508.1 Isoelectric Point: 6.6272 |
Chromosome | Chromosome/Scaffold: 1 Start: 4653894 End: 4654841 |
Description | pectin methylesterase 31 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 4 | 293 | 0 |
TVSHDGSGDYRTVQEAIDAVPLRNNSRIVIRILPGIYNQPVYVPKTKNLITLTAWLPEDTVLTWNNTATKIDHHQNPDIIGTGTFACGSTIVEGEDFIAE NITFENSSPEGSGQAVAMRVTADRCAFYNCRFLGWQDTLYLHYGKHYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSEGFITAHKRNTCEEPTGYVFLRC VITGNGGSTPYVFLGRPWGPCGRVVFAFTYMDACVKHVGWNNWDKVENEGSACFNEYRCFGPGSCPEKRVRWARQLVCEEADQYLRHCYI |
Full Sequence |
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Protein Sequence Length: 316 Download |
MSKTVSHDGS GDYRTVQEAI DAVPLRNNSR IVIRILPGIY NQPVYVPKTK NLITLTAWLP 60 EDTVLTWNNT ATKIDHHQNP DIIGTGTFAC GSTIVEGEDF IAENITFENS SPEGSGQAVA 120 MRVTADRCAF YNCRFLGWQD TLYLHYGKHY LKDCYIEGSV DFIFGNSTAL LEHCHIHCKS 180 EGFITAHKRN TCEEPTGYVF LRCVITGNGG STPYVFLGRP WGPCGRVVFA FTYMDACVKH 240 VGWNNWDKVE NEGSACFNEY RCFGPGSCPE KRVRWARQLV CEEADQYLRH CYIDPDPQKS 300 WLAERTAALR IPHSA* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01095 | Pectinesterase | 9.0e-76 | 4 | 276 | 283 | + Pectinesterase. | ||
PLN02665 | PLN02665 | 6.0e-89 | 4 | 302 | 307 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 3.0e-94 | 4 | 302 | 301 | + putative pectinesterase | ||
PLN02682 | PLN02682 | 3.0e-97 | 9 | 294 | 293 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 0 | 4 | 315 | 312 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 5 | 275 | 11 | 281 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 1.99965e-42 | 5 | 275 | 7 | 277 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 2e-22 | 6 | 289 | 12 | 330 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 2e-22 | 6 | 289 | 12 | 330 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 2e-22 | 6 | 289 | 12 | 330 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Sequence Alignments (This image is cropped. Click for full image.) |
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